fast.genomicscompare 6,575 genera of bacteria & archaea

 

SCMT01 sp013141175 P-RSF-NP-01

Genome identifier: GCA_013141175.1

NCBI assembly name: ASM1314117v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, SCMT01, SCMT01 sp013141175

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Lysobacter

Scaffolds: 1

Genes: 3,614 Protein-coding: 3,519 RNAs: 52 pseudogenes: 43

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JABFRN010000001.1 MAG: Lysobacter sp. isolate P-RSF-NP-01 c_000000000002, whole genome shotgun sequence 4,155,120

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory