fast.genomicscompare 6,575 genera of bacteria & archaea

 

DT-32 sp013214065 DT_32

Genome identifier: GCA_013214065.1

NCBI assembly name: ASM1321406v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, DT-32, DT-32 sp013214065

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae

Scaffolds: 24

Genes: 3,291 Protein-coding: 3,227 RNAs: 42 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JABSPK010000001.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_1, whole genome shotgun sequence 135,909
JABSPK010000002.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_2, whole genome shotgun sequence 550,387
JABSPK010000003.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_3, whole genome shotgun sequence 462,027
JABSPK010000004.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_4, whole genome shotgun sequence 427,351
JABSPK010000005.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_5, whole genome shotgun sequence 328,744
JABSPK010000006.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_6, whole genome shotgun sequence 244,453
JABSPK010000007.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_7, whole genome shotgun sequence 156,758
JABSPK010000008.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_8, whole genome shotgun sequence 144,389
JABSPK010000009.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_9, whole genome shotgun sequence 138,779
JABSPK010000010.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_10, whole genome shotgun sequence 111,916
JABSPK010000011.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_11, whole genome shotgun sequence 107,291
JABSPK010000012.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_12, whole genome shotgun sequence 98,392
JABSPK010000013.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_13, whole genome shotgun sequence 98,133
JABSPK010000014.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_14, whole genome shotgun sequence 87,477
JABSPK010000015.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_15, whole genome shotgun sequence 75,351
JABSPK010000016.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_16, whole genome shotgun sequence 72,066
JABSPK010000017.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_17, whole genome shotgun sequence 69,968
JABSPK010000018.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_18, whole genome shotgun sequence 63,004
JABSPK010000019.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_19, whole genome shotgun sequence 36,388
JABSPK010000020.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_20, whole genome shotgun sequence 24,532
JABSPK010000021.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_21, whole genome shotgun sequence 20,064
JABSPK010000022.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_22, whole genome shotgun sequence 14,595
JABSPK010000023.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_23, whole genome shotgun sequence 5,615
JABSPK010000024.1 MAG: Flavobacteriaceae bacterium isolate DT_32 DT-Flavobacteriaceae-1_scaffold_24, whole genome shotgun sequence 1,554

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory