fast.genomicscompare 6,575 genera of bacteria & archaea

 

JABWCD01 sp013359265 MAG_47

Genome identifier: GCA_013359265.1

NCBI assembly name: ASM1335926v1

GTDB taxonomy: Bacteria, Hydrogenedentota, Hydrogenedentia, Hydrogenedentiales, SLHB01, JABWCD01, JABWCD01 sp013359265

NCBI taxonomy: Bacteria, Candidatus Hydrogenedentes

Scaffolds: 54

Genes: 5,073 Protein-coding: 4,973 RNAs: 51 pseudogenes: 49

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JABWCD010000001.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_6, whole genome shotgun sequence 300,827
JABWCD010000002.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_10, whole genome shotgun sequence 249,229
JABWCD010000003.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_11, whole genome shotgun sequence 349,814
JABWCD010000004.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_19, whole genome shotgun sequence 363,381
JABWCD010000005.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_20, whole genome shotgun sequence 398,694
JABWCD010000006.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_21, whole genome shotgun sequence 329,525
JABWCD010000007.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_30, whole genome shotgun sequence 189,172
JABWCD010000008.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_35, whole genome shotgun sequence 184,698
JABWCD010000009.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_36, whole genome shotgun sequence 184,653
JABWCD010000010.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_48, whole genome shotgun sequence 165,032
JABWCD010000011.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_54, whole genome shotgun sequence 265,716
JABWCD010000012.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_58, whole genome shotgun sequence 153,066
JABWCD010000013.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_80, whole genome shotgun sequence 135,766
JABWCD010000014.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_95, whole genome shotgun sequence 121,652
JABWCD010000015.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_97, whole genome shotgun sequence 121,440
JABWCD010000016.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_107, whole genome shotgun sequence 186,961
JABWCD010000017.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_113, whole genome shotgun sequence 114,903
JABWCD010000018.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_117, whole genome shotgun sequence 114,855
JABWCD010000019.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_130, whole genome shotgun sequence 108,830
JABWCD010000020.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_134, whole genome shotgun sequence 132,852
JABWCD010000021.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_135, whole genome shotgun sequence 106,644
JABWCD010000022.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_137, whole genome shotgun sequence 186,997
JABWCD010000023.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_169, whole genome shotgun sequence 146,707
JABWCD010000024.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_198, whole genome shotgun sequence 83,122
JABWCD010000025.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_215, whole genome shotgun sequence 78,564
JABWCD010000026.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_280, whole genome shotgun sequence 71,086
JABWCD010000027.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_289, whole genome shotgun sequence 132,080
JABWCD010000028.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_313, whole genome shotgun sequence 76,999
JABWCD010000029.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_328, whole genome shotgun sequence 65,284
JABWCD010000030.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_364, whole genome shotgun sequence 167,219
JABWCD010000031.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_377, whole genome shotgun sequence 62,148
JABWCD010000032.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_441, whole genome shotgun sequence 56,130
JABWCD010000033.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_498, whole genome shotgun sequence 114,840
JABWCD010000034.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_508, whole genome shotgun sequence 52,284
JABWCD010000035.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_582, whole genome shotgun sequence 113,695
JABWCD010000036.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_586, whole genome shotgun sequence 55,614
JABWCD010000037.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_624, whole genome shotgun sequence 46,430
JABWCD010000038.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_715, whole genome shotgun sequence 43,022
JABWCD010000039.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_761, whole genome shotgun sequence 54,391
JABWCD010000040.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_795, whole genome shotgun sequence 40,667
JABWCD010000041.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_985, whole genome shotgun sequence 36,546
JABWCD010000042.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_1658, whole genome shotgun sequence 26,840
JABWCD010000043.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_1777, whole genome shotgun sequence 25,860
JABWCD010000044.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_1800, whole genome shotgun sequence 25,691
JABWCD010000045.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_2664, whole genome shotgun sequence 20,590
JABWCD010000046.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_3585, whole genome shotgun sequence 17,134
JABWCD010000047.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_3775, whole genome shotgun sequence 16,584
JABWCD010000048.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_4123, whole genome shotgun sequence 15,686
JABWCD010000049.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_10760, whole genome shotgun sequence 8,194
JABWCD010000050.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_14762, whole genome shotgun sequence 6,535
JABWCD010000051.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_19264, whole genome shotgun sequence 5,375
JABWCD010000052.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_57756, whole genome shotgun sequence 2,280
JABWCD010000053.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_81064, whole genome shotgun sequence 1,698
JABWCD010000054.1 MAG: Candidatus Hydrogenedentota bacterium isolate MAG_47 scaffold_90085, whole genome shotgun sequence 1,545

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory