fast.genomicscompare 6,575 genera of bacteria & archaea

 

JABWBH01 sp013360585 MAG_25

Genome identifier: GCA_013360585.1

NCBI assembly name: ASM1336058v1

GTDB taxonomy: Bacteria, Planctomycetota, Phycisphaerae, UBA1845, UBA1845, JABWBH01, JABWBH01 sp013360585

NCBI taxonomy: Bacteria, Planctomycetota, Phycisphaerae

Scaffolds: 84

Genes: 3,356 Protein-coding: 3,274 RNAs: 53 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JABWBH010000001.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_70, whole genome shotgun sequence 158,808
JABWBH010000002.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_72, whole genome shotgun sequence 152,331
JABWBH010000003.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_98, whole genome shotgun sequence 121,151
JABWBH010000004.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_103, whole genome shotgun sequence 119,290
JABWBH010000005.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_110, whole genome shotgun sequence 139,981
JABWBH010000006.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_111, whole genome shotgun sequence 119,348
JABWBH010000007.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_118, whole genome shotgun sequence 112,978
JABWBH010000008.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_123, whole genome shotgun sequence 111,959
JABWBH010000009.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_136, whole genome shotgun sequence 106,638
JABWBH010000010.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_143, whole genome shotgun sequence 103,146
JABWBH010000011.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_152, whole genome shotgun sequence 97,351
JABWBH010000012.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_163, whole genome shotgun sequence 111,200
JABWBH010000013.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_179, whole genome shotgun sequence 159,595
JABWBH010000014.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_205, whole genome shotgun sequence 141,710
JABWBH010000015.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_227, whole genome shotgun sequence 109,277
JABWBH010000016.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_231, whole genome shotgun sequence 76,034
JABWBH010000017.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_237, whole genome shotgun sequence 76,877
JABWBH010000018.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_259, whole genome shotgun sequence 73,299
JABWBH010000019.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_275, whole genome shotgun sequence 71,559
JABWBH010000020.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_329, whole genome shotgun sequence 65,233
JABWBH010000021.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_365, whole genome shotgun sequence 62,851
JABWBH010000022.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_383, whole genome shotgun sequence 86,208
JABWBH010000023.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_399, whole genome shotgun sequence 59,400
JABWBH010000024.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_408, whole genome shotgun sequence 58,845
JABWBH010000025.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_429, whole genome shotgun sequence 100,904
JABWBH010000026.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_439, whole genome shotgun sequence 56,356
JABWBH010000027.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_452, whole genome shotgun sequence 88,776
JABWBH010000028.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_480, whole genome shotgun sequence 53,882
JABWBH010000029.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_482, whole genome shotgun sequence 53,781
JABWBH010000030.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_501, whole genome shotgun sequence 52,681
JABWBH010000031.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_571, whole genome shotgun sequence 56,266
JABWBH010000032.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_581, whole genome shotgun sequence 48,253
JABWBH010000033.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_591, whole genome shotgun sequence 47,726
JABWBH010000034.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_607, whole genome shotgun sequence 46,979
JABWBH010000035.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_613, whole genome shotgun sequence 46,763
JABWBH010000036.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_615, whole genome shotgun sequence 47,927
JABWBH010000037.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_644, whole genome shotgun sequence 87,686
JABWBH010000038.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_665, whole genome shotgun sequence 44,831
JABWBH010000039.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_694, whole genome shotgun sequence 45,535
JABWBH010000040.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_710, whole genome shotgun sequence 43,144
JABWBH010000041.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_794, whole genome shotgun sequence 44,276
JABWBH010000042.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_803, whole genome shotgun sequence 77,272
JABWBH010000043.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_815, whole genome shotgun sequence 39,812
JABWBH010000044.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_907, whole genome shotgun sequence 43,081
JABWBH010000045.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_1021, whole genome shotgun sequence 35,899
JABWBH010000046.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_1043, whole genome shotgun sequence 45,903
JABWBH010000047.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_1074, whole genome shotgun sequence 35,290
JABWBH010000048.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_1274, whole genome shotgun sequence 31,000
JABWBH010000049.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_1282, whole genome shotgun sequence 32,497
JABWBH010000050.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_1494, whole genome shotgun sequence 28,449
JABWBH010000051.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_2154, whole genome shotgun sequence 23,285
JABWBH010000052.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_2540, whole genome shotgun sequence 21,253
JABWBH010000053.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_2637, whole genome shotgun sequence 20,766
JABWBH010000054.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_2653, whole genome shotgun sequence 20,660
JABWBH010000055.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_3061, whole genome shotgun sequence 18,847
JABWBH010000056.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_3241, whole genome shotgun sequence 20,280
JABWBH010000057.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_3429, whole genome shotgun sequence 30,818
JABWBH010000058.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_3478, whole genome shotgun sequence 17,422
JABWBH010000059.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_3698, whole genome shotgun sequence 16,843
JABWBH010000060.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_3884, whole genome shotgun sequence 16,814
JABWBH010000061.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_4209, whole genome shotgun sequence 15,454
JABWBH010000062.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_4364, whole genome shotgun sequence 15,108
JABWBH010000063.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_4381, whole genome shotgun sequence 15,081
JABWBH010000064.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_4457, whole genome shotgun sequence 14,928
JABWBH010000065.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_4584, whole genome shotgun sequence 30,434
JABWBH010000066.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_7618, whole genome shotgun sequence 10,389
JABWBH010000067.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_9890, whole genome shotgun sequence 8,698
JABWBH010000068.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_11122, whole genome shotgun sequence 8,005
JABWBH010000069.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_11146, whole genome shotgun sequence 7,994
JABWBH010000070.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_13666, whole genome shotgun sequence 6,919
JABWBH010000071.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_13980, whole genome shotgun sequence 6,795
JABWBH010000072.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_16537, whole genome shotgun sequence 6,021
JABWBH010000073.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_18010, whole genome shotgun sequence 5,647
JABWBH010000074.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_19757, whole genome shotgun sequence 5,758
JABWBH010000075.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_21058, whole genome shotgun sequence 5,026
JABWBH010000076.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_24105, whole genome shotgun sequence 4,540
JABWBH010000077.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_24680, whole genome shotgun sequence 4,465
JABWBH010000078.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_25522, whole genome shotgun sequence 7,740
JABWBH010000079.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_25651, whole genome shotgun sequence 4,334
JABWBH010000080.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_30556, whole genome shotgun sequence 5,954
JABWBH010000081.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_37957, whole genome shotgun sequence 3,202
JABWBH010000082.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_38605, whole genome shotgun sequence 3,164
JABWBH010000083.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_44328, whole genome shotgun sequence 2,837
JABWBH010000084.1 MAG: Phycisphaerae bacterium isolate MAG_25 scaffold_63273, whole genome shotgun sequence 2,108

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory