fast.genomicscompare 6,575 genera of bacteria & archaea

 

JABWAT01 sp013360915 MAG_11

Genome identifier: GCA_013360915.1

NCBI assembly name: ASM1336091v1

GTDB taxonomy: Bacteria, Bacteroidota, JABWAT01, JABWAT01, JABWAT01, JABWAT01, JABWAT01 sp013360915

NCBI taxonomy: Bacteria, Bacteroidota

Scaffolds: 51

Genes: 3,160 Protein-coding: 3,102 RNAs: 49 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JABWAT010000001.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_0, whole genome shotgun sequence 857,185
JABWAT010000002.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_1, whole genome shotgun sequence 620,008
JABWAT010000003.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_23, whole genome shotgun sequence 204,839
JABWAT010000004.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_47, whole genome shotgun sequence 166,923
JABWAT010000005.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_52, whole genome shotgun sequence 157,758
JABWAT010000006.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_62, whole genome shotgun sequence 160,093
JABWAT010000007.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_81, whole genome shotgun sequence 135,609
JABWAT010000008.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_109, whole genome shotgun sequence 116,682
JABWAT010000009.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_138, whole genome shotgun sequence 106,014
JABWAT010000010.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_162, whole genome shotgun sequence 126,064
JABWAT010000011.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_266, whole genome shotgun sequence 72,511
JABWAT010000012.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_292, whole genome shotgun sequence 69,593
JABWAT010000013.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_332, whole genome shotgun sequence 88,149
JABWAT010000014.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_406, whole genome shotgun sequence 58,869
JABWAT010000015.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_414, whole genome shotgun sequence 58,323
JABWAT010000016.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_435, whole genome shotgun sequence 68,948
JABWAT010000017.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_491, whole genome shotgun sequence 53,213
JABWAT010000018.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_531, whole genome shotgun sequence 50,812
JABWAT010000019.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_532, whole genome shotgun sequence 50,703
JABWAT010000020.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_705, whole genome shotgun sequence 43,380
JABWAT010000021.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_788, whole genome shotgun sequence 40,788
JABWAT010000022.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_814, whole genome shotgun sequence 45,191
JABWAT010000023.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_1000, whole genome shotgun sequence 36,252
JABWAT010000024.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_1294, whole genome shotgun sequence 30,743
JABWAT010000025.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_1597, whole genome shotgun sequence 29,335
JABWAT010000026.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_1625, whole genome shotgun sequence 27,206
JABWAT010000027.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_2113, whole genome shotgun sequence 23,553
JABWAT010000028.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_2324, whole genome shotgun sequence 22,325
JABWAT010000029.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_2783, whole genome shotgun sequence 20,071
JABWAT010000030.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_3180, whole genome shotgun sequence 18,436
JABWAT010000031.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_4223, whole genome shotgun sequence 15,412
JABWAT010000032.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_4496, whole genome shotgun sequence 14,855
JABWAT010000033.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_6602, whole genome shotgun sequence 11,523
JABWAT010000034.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_18477, whole genome shotgun sequence 5,544
JABWAT010000035.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_19748, whole genome shotgun sequence 7,487
JABWAT010000036.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_21998, whole genome shotgun sequence 4,864
JABWAT010000037.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_26341, whole genome shotgun sequence 4,253
JABWAT010000038.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_28485, whole genome shotgun sequence 4,003
JABWAT010000039.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_37049, whole genome shotgun sequence 3,264
JABWAT010000040.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_37325, whole genome shotgun sequence 3,243
JABWAT010000041.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_37466, whole genome shotgun sequence 3,234
JABWAT010000042.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_46177, whole genome shotgun sequence 2,743
JABWAT010000043.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_67005, whole genome shotgun sequence 2,008
JABWAT010000044.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_69780, whole genome shotgun sequence 1,939
JABWAT010000045.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_77926, whole genome shotgun sequence 1,757
JABWAT010000046.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_78064, whole genome shotgun sequence 1,754
JABWAT010000047.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_79022, whole genome shotgun sequence 1,736
JABWAT010000048.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_85426, whole genome shotgun sequence 3,136
JABWAT010000049.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_85729, whole genome shotgun sequence 1,614
JABWAT010000050.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_86801, whole genome shotgun sequence 1,597
JABWAT010000051.1 MAG: Bacteroidetes bacterium isolate MAG_11 scaffold_105841, whole genome shotgun sequence 1,840

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory