fast.genomicscompare 6,575 genera of bacteria & archaea

 

JABDMD01 sp014075255 MH-Pat-all_autometa_1-2

Genome identifier: GCA_014075255.1

NCBI assembly name: ASM1407525v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, UBA4575, UBA4575, JABDMD01, JABDMD01 sp014075255

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria

Scaffolds: 1

Genes: 2,709 Protein-coding: 2,644 RNAs: 42 pseudogenes: 23

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
CP046178.1 MAG: Gammaproteobacteria bacterium isolate MH-Pat-all_autometa_1-2 chromosome 2,650,119

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory