fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACIXR01 sp014360495 MAG-57

Genome identifier: GCA_014360495.1

NCBI assembly name: ASM1436049v1

GTDB taxonomy: Bacteria, JACIXR01, JACIXR01, JACIXR01, JACIXR01, JACIXR01, JACIXR01 sp014360495

NCBI taxonomy: Bacteria

Scaffolds: 18

Genes: 2,141 Protein-coding: 2,077 RNAs: 52 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACIXR010000001.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_1, whole genome shotgun sequence 403,142
JACIXR010000002.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_2, whole genome shotgun sequence 292,038
JACIXR010000003.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_3, whole genome shotgun sequence 269,246
JACIXR010000004.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_4, whole genome shotgun sequence 266,941
JACIXR010000005.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_5, whole genome shotgun sequence 232,893
JACIXR010000006.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_6, whole genome shotgun sequence 202,455
JACIXR010000007.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_7, whole genome shotgun sequence 179,764
JACIXR010000008.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_8, whole genome shotgun sequence 143,290
JACIXR010000009.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_9, whole genome shotgun sequence 130,205
JACIXR010000010.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_10, whole genome shotgun sequence 99,491
JACIXR010000011.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_11, whole genome shotgun sequence 77,813
JACIXR010000012.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_12, whole genome shotgun sequence 74,380
JACIXR010000013.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_13, whole genome shotgun sequence 60,788
JACIXR010000014.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_14, whole genome shotgun sequence 39,303
JACIXR010000015.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_15, whole genome shotgun sequence 25,905
JACIXR010000016.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_16, whole genome shotgun sequence 20,907
JACIXR010000017.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_17, whole genome shotgun sequence 20,139
JACIXR010000018.1 MAG: bacterium isolate MAG-57 Unclassified_E3_bin25_Scaffold_18, whole genome shotgun sequence 12,201

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory