fast.genomicscompare 6,575 genera of bacteria & archaea

 

WJMO01 sp014727915 Bin_400

Genome identifier: GCA_014727915.1

NCBI assembly name: ASM1472791v1

GTDB taxonomy: Archaea, Altiarchaeota, Altiarchaeia, IMC4, SCGC-AAA252-I15, WJMO01, WJMO01 sp014727915

NCBI taxonomy: Archaea, Candidatus Altiarchaeota, Candidatus Altiarchaeales

Scaffolds: 13

Genes: 1,904 Protein-coding: 1,856 RNAs: 37 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
WJMO01000001.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_93406, whole genome shotgun sequence 62,005
WJMO01000002.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_165614, whole genome shotgun sequence 4,256
WJMO01000003.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_166125, whole genome shotgun sequence 34,024
WJMO01000004.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_622690, whole genome shotgun sequence 102,308
WJMO01000005.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_810232, whole genome shotgun sequence 511,242
WJMO01000006.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_2680490, whole genome shotgun sequence 536,761
WJMO01000007.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_2818092, whole genome shotgun sequence 97,772
WJMO01000008.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_2854122, whole genome shotgun sequence 86,375
WJMO01000009.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_3519076, whole genome shotgun sequence 167,942
WJMO01000010.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_3726146, whole genome shotgun sequence 48,168
WJMO01000011.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_3778155, whole genome shotgun sequence 85,465
WJMO01000012.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_3832528, whole genome shotgun sequence 39,489
WJMO01000013.1 MAG: Candidatus Altiarchaeales archaeon isolate Bin_400 k141_4759183, whole genome shotgun sequence 33,167

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory