fast.genomicscompare 6,575 genera of bacteria & archaea

 

SpSt-1174 sp014762505 Bin_1

Genome identifier: GCA_014762505.1

NCBI assembly name: ASM1476250v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, SpSt-1174, SpSt-1174, SpSt-1174, SpSt-1174 sp014762505

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales

Scaffolds: 43

Genes: 2,769 Protein-coding: 2,698 RNAs: 55 pseudogenes: 16

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JABURS010000001.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_23602_length_1341_cov_1905.4, whole genome shotgun sequence 1,341
JABURS010000002.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_23159_length_1355_cov_703.859, whole genome shotgun sequence 1,355
JABURS010000003.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_12848_length_1898_cov_798.514, whole genome shotgun sequence 1,898
JABURS010000004.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_1308_length_9472_cov_604.843, whole genome shotgun sequence 9,472
JABURS010000005.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_4586_length_3590_cov_482.615, whole genome shotgun sequence 3,590
JABURS010000006.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_1141_length_10974_cov_589.088, whole genome shotgun sequence 10,974
JABURS010000007.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_34849_length_1079_cov_1061.58, whole genome shotgun sequence 1,079
JABURS010000008.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_963_length_12969_cov_423.816, whole genome shotgun sequence 12,969
JABURS010000009.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_804_length_15389_cov_382.857, whole genome shotgun sequence 15,331
JABURS010000010.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_314_length_38670_cov_428.472, whole genome shotgun sequence 38,670
JABURS010000011.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_441_length_28804_cov_464.336, whole genome shotgun sequence 28,804
JABURS010000012.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_22941_length_1362_cov_308.654, whole genome shotgun sequence 1,362
JABURS010000013.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_255_length_45470_cov_437.827, whole genome shotgun sequence 45,470
JABURS010000014.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_997_length_12522_cov_515.728, whole genome shotgun sequence 12,522
JABURS010000015.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_798_length_15466_cov_548.746, whole genome shotgun sequence 15,466
JABURS010000016.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_321_length_37990_cov_440.162, whole genome shotgun sequence 37,990
JABURS010000017.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_1116_length_11294_cov_343.823, whole genome shotgun sequence 11,294
JABURS010000018.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_130_length_74764_cov_440.627, whole genome shotgun sequence 74,764
JABURS010000019.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_84_length_89193_cov_481.3, whole genome shotgun sequence 89,193
JABURS010000020.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_28810_length_1198_cov_1927.88, whole genome shotgun sequence 1,198
JABURS010000021.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_744_length_16659_cov_474.555, whole genome shotgun sequence 16,602
JABURS010000022.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_1721_length_7418_cov_500.629, whole genome shotgun sequence 7,418
JABURS010000023.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_387_length_31908_cov_460.225, whole genome shotgun sequence 31,908
JABURS010000024.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_597_length_21318_cov_408.283, whole genome shotgun sequence 21,318
JABURS010000025.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_15675_length_1695_cov_937.963, whole genome shotgun sequence 1,695
JABURS010000026.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_684_length_18558_cov_432.511, whole genome shotgun sequence 18,558
JABURS010000027.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_580_length_21962_cov_508.632, whole genome shotgun sequence 21,962
JABURS010000028.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_50_length_120106_cov_460.987, whole genome shotgun sequence 120,106
JABURS010000029.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_21_length_169124_cov_433.076, whole genome shotgun sequence 169,124
JABURS010000030.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_110_length_80050_cov_467.787, whole genome shotgun sequence 80,050
JABURS010000031.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_100_length_84649_cov_439.572, whole genome shotgun sequence 84,649
JABURS010000032.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_13_length_211449_cov_452.479, whole genome shotgun sequence 211,449
JABURS010000033.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_60_length_111039_cov_445.794, whole genome shotgun sequence 111,039
JABURS010000034.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_124_length_76985_cov_446.94, whole genome shotgun sequence 76,985
JABURS010000035.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_18_length_190345_cov_468.407, whole genome shotgun sequence 190,345
JABURS010000036.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_230_length_48442_cov_466.878, whole genome shotgun sequence 48,442
JABURS010000037.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_41_length_130700_cov_466.544, whole genome shotgun sequence 130,700
JABURS010000038.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_94_length_86295_cov_449.336, whole genome shotgun sequence 86,295
JABURS010000039.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_32852_length_1114_cov_2982.38, whole genome shotgun sequence 1,114
JABURS010000040.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_165_length_62108_cov_453.747, whole genome shotgun sequence 62,108
JABURS010000041.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_29_length_153855_cov_439.655, whole genome shotgun sequence 153,855
JABURS010000042.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_8_length_277590_cov_428.212, whole genome shotgun sequence 277,590
JABURS010000043.1 MAG: Chromatiales bacterium isolate Bin_1 NODE_5_length_428302_cov_483.054, whole genome shotgun sequence 428,302

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory