fast.genomicscompare 6,575 genera of bacteria & archaea

 

CACZYB01 sp014803575 Mgla_MAG_30-bin_7

Genome identifier: GCA_014803575.1

NCBI assembly name: ASM1480357v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rs-D84, CACZYB01, CACZYB01, CACZYB01 sp014803575

NCBI taxonomy: Bacteria

Scaffolds: 26

Genes: 1,189 Protein-coding: 1,135 RNAs: 43 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAAVBO010000001.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000006183, whole genome shotgun sequence 54,656
JAAVBO010000002.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000006188, whole genome shotgun sequence 14,680
JAAVBO010000003.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000006231, whole genome shotgun sequence 204,572
JAAVBO010000004.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000006252, whole genome shotgun sequence 33,640
JAAVBO010000005.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000006520, whole genome shotgun sequence 13,941
JAAVBO010000006.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000006632, whole genome shotgun sequence 85,459
JAAVBO010000007.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000006893, whole genome shotgun sequence 14,559
JAAVBO010000008.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000006998, whole genome shotgun sequence 137,941
JAAVBO010000009.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000007372, whole genome shotgun sequence 61,345
JAAVBO010000010.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000007421, whole genome shotgun sequence 5,414
JAAVBO010000011.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000007432, whole genome shotgun sequence 34,972
JAAVBO010000012.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000007447, whole genome shotgun sequence 17,709
JAAVBO010000013.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000007502, whole genome shotgun sequence 39,351
JAAVBO010000014.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000007533, whole genome shotgun sequence 80,203
JAAVBO010000015.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000007593, whole genome shotgun sequence 29,428
JAAVBO010000016.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000007762, whole genome shotgun sequence 32,855
JAAVBO010000017.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000049171, whole genome shotgun sequence 18,540
JAAVBO010000018.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000049748, whole genome shotgun sequence 45,158
JAAVBO010000019.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000050215, whole genome shotgun sequence 25,971
JAAVBO010000020.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000050351, whole genome shotgun sequence 7,101
JAAVBO010000021.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000050478, whole genome shotgun sequence 9,363
JAAVBO010000022.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000050827, whole genome shotgun sequence 70,172
JAAVBO010000023.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000050854, whole genome shotgun sequence 28,796
JAAVBO010000024.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000050871, whole genome shotgun sequence 6,756
JAAVBO010000025.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000051181, whole genome shotgun sequence 32,004
JAAVBO010000026.1 MAG: bacterium isolate Mgla_MAG_30-bin_7 c_000000051440, whole genome shotgun sequence 13,283

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory