fast.genomicscompare 6,575 genera of bacteria & archaea

 

JABWCC01 sp013359315 H5_SPI2

Genome identifier: GCA_015075105.1

NCBI assembly name: ASM1507510v1

GTDB taxonomy: Bacteria, Spirochaetota, Leptospirae, Leptospirales, Leptospiraceae, JABWCC01, JABWCC01 sp013359315

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Leptospirales, Leptospiraceae

Scaffolds: 4

Genes: 3,341 Protein-coding: 3,234 RNAs: 44 pseudogenes: 63

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JABTUZ010000001.1 MAG: Leptospiraceae bacterium isolate H5_SPI2 seq001, whole genome shotgun sequence 2,007,153
JABTUZ010000002.1 MAG: Leptospiraceae bacterium isolate H5_SPI2 seq002, whole genome shotgun sequence 1,410,425
JABTUZ010000003.1 MAG: Leptospiraceae bacterium isolate H5_SPI2 seq003, whole genome shotgun sequence 3,575
JABTUZ010000004.1 MAG: Leptospiraceae bacterium isolate H5_SPI2 seq004, whole genome shotgun sequence 2,199

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory