fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADFCQ01 sp015223225 H6797

Genome identifier: GCA_015223225.1

NCBI assembly name: ASM1522322v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Acetobacterales, Acetobacteraceae, JADFCQ01, JADFCQ01 sp015223225

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae

Scaffolds: 9

Genes: 4,581 Protein-coding: 4,492 RNAs: 60 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADFCQ010000001.1 Acetobacteraceae bacterium H6797 19074_1, whole genome shotgun sequence 1,450,738
JADFCQ010000002.1 Acetobacteraceae bacterium H6797 19074_2, whole genome shotgun sequence 763,353
JADFCQ010000003.1 Acetobacteraceae bacterium H6797 19074_3, whole genome shotgun sequence 622,021
JADFCQ010000004.1 Acetobacteraceae bacterium H6797 19074_4, whole genome shotgun sequence 598,380
JADFCQ010000005.1 Acetobacteraceae bacterium H6797 19074_5, whole genome shotgun sequence 511,804
JADFCQ010000006.1 Acetobacteraceae bacterium H6797 19074_6, whole genome shotgun sequence 496,606
JADFCQ010000007.1 Acetobacteraceae bacterium H6797 19074_7, whole genome shotgun sequence 394,063
JADFCQ010000008.1 Acetobacteraceae bacterium H6797 19074_8, whole genome shotgun sequence 5,621
JADFCQ010000009.1 Acetobacteraceae bacterium H6797 19074_9, whole genome shotgun sequence 1,638

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory