fast.genomicscompare 6,575 genera of bacteria & archaea

 

RI-182 sp016124575 RI_182

Genome identifier: GCA_016124575.1

NCBI assembly name: ASM1612457v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, UA16, RI-182, RI-182 sp016124575

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Cryomorphaceae

Scaffolds: 61

Genes: 3,073 Protein-coding: 3,004 RNAs: 50 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
WGNM01000001.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000075887, whole genome shotgun sequence 192,390
WGNM01000002.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000007595, whole genome shotgun sequence 31,241
WGNM01000003.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000144858, whole genome shotgun sequence 102,754
WGNM01000004.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000043941, whole genome shotgun sequence 96,079
WGNM01000005.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000101979, whole genome shotgun sequence 229,687
WGNM01000006.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000055784, whole genome shotgun sequence 31,111
WGNM01000007.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000117785, whole genome shotgun sequence 177,576
WGNM01000008.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000131750, whole genome shotgun sequence 66,910
WGNM01000009.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000194694, whole genome shotgun sequence 35,880
WGNM01000010.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000022565, whole genome shotgun sequence 45,791
WGNM01000011.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000136377, whole genome shotgun sequence 84,919
WGNM01000012.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000158036, whole genome shotgun sequence 92,172
WGNM01000013.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000023192, whole genome shotgun sequence 56,430
WGNM01000014.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000091939, whole genome shotgun sequence 39,668
WGNM01000015.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000010396, whole genome shotgun sequence 15,167
WGNM01000016.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000072204, whole genome shotgun sequence 229,477
WGNM01000017.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000194622, whole genome shotgun sequence 29,042
WGNM01000018.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000077795, whole genome shotgun sequence 129,845
WGNM01000019.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000113672, whole genome shotgun sequence 42,900
WGNM01000020.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000009088, whole genome shotgun sequence 117,891
WGNM01000021.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000009816, whole genome shotgun sequence 88,522
WGNM01000022.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000005288, whole genome shotgun sequence 151,056
WGNM01000023.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000195663, whole genome shotgun sequence 213,365
WGNM01000024.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000173970, whole genome shotgun sequence 12,085
WGNM01000025.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000095382, whole genome shotgun sequence 67,687
WGNM01000026.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000022868, whole genome shotgun sequence 19,832
WGNM01000027.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000075615, whole genome shotgun sequence 72,885
WGNM01000028.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000039666, whole genome shotgun sequence 44,814
WGNM01000029.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000019270, whole genome shotgun sequence 32,330
WGNM01000030.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000101941, whole genome shotgun sequence 12,930
WGNM01000031.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000048585, whole genome shotgun sequence 27,186
WGNM01000032.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000055628, whole genome shotgun sequence 29,605
WGNM01000033.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000174016, whole genome shotgun sequence 119,998
WGNM01000034.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000194951, whole genome shotgun sequence 88,717
WGNM01000035.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000026885, whole genome shotgun sequence 12,190
WGNM01000036.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000146349, whole genome shotgun sequence 19,053
WGNM01000037.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000078224, whole genome shotgun sequence 10,352
WGNM01000038.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000010660, whole genome shotgun sequence 11,140
WGNM01000039.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000105374, whole genome shotgun sequence 110,758
WGNM01000040.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000035388, whole genome shotgun sequence 43,560
WGNM01000041.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000035148, whole genome shotgun sequence 48,611
WGNM01000042.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000009553, whole genome shotgun sequence 62,449
WGNM01000043.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000011105, whole genome shotgun sequence 13,716
WGNM01000044.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000007185, whole genome shotgun sequence 139,800
WGNM01000045.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000119958, whole genome shotgun sequence 29,555
WGNM01000046.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000023015, whole genome shotgun sequence 36,166
WGNM01000047.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000157435, whole genome shotgun sequence 30,123
WGNM01000048.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000022800, whole genome shotgun sequence 46,635
WGNM01000049.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000040252, whole genome shotgun sequence 11,665
WGNM01000050.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000005780, whole genome shotgun sequence 10,131
WGNM01000051.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000083943, whole genome shotgun sequence 12,273
WGNM01000052.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000078440, whole genome shotgun sequence 15,639
WGNM01000053.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000065595, whole genome shotgun sequence 16,934
WGNM01000054.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000125813, whole genome shotgun sequence 11,949
WGNM01000055.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000000476, whole genome shotgun sequence 24,850
WGNM01000056.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000026237, whole genome shotgun sequence 11,390
WGNM01000057.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000101704, whole genome shotgun sequence 19,871
WGNM01000058.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000118234, whole genome shotgun sequence 13,184
WGNM01000059.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000095145, whole genome shotgun sequence 47,683
WGNM01000060.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000007798, whole genome shotgun sequence 28,761
WGNM01000061.1 MAG: Cryomorphaceae bacterium isolate RI_182 c_000000039869, whole genome shotgun sequence 14,754

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory