fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACQQX01 sp016197155 NC_groundwater_804_Pr6_B-0.1um_56_12

Genome identifier: GCA_016197155.1

NCBI assembly name: ASM1619715v1

GTDB taxonomy: Bacteria, Omnitrophota, Koll11, 2-02-FULL-51-18, 2-02-FULL-51-18, JACQQX01, JACQQX01 sp016197155

NCBI taxonomy: Bacteria, Candidatus Omnitrophota

Scaffolds: 40

Genes: 1,479 Protein-coding: 1,418 RNAs: 47 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACPWF010000001.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_143138, whole genome shotgun sequence 3,368
JACPWF010000002.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_145928, whole genome shotgun sequence 2,159
JACPWF010000003.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_57220, whole genome shotgun sequence 48,521
JACPWF010000004.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_155284, whole genome shotgun sequence 35,528
JACPWF010000005.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_26421, whole genome shotgun sequence 14,703
JACPWF010000006.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_202817, whole genome shotgun sequence 74,468
JACPWF010000007.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_253913, whole genome shotgun sequence 38,988
JACPWF010000008.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_130997, whole genome shotgun sequence 30,044
JACPWF010000009.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_268320, whole genome shotgun sequence 23,697
JACPWF010000010.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_261830, whole genome shotgun sequence 7,417
JACPWF010000011.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_272364, whole genome shotgun sequence 13,286
JACPWF010000012.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_97320, whole genome shotgun sequence 47,933
JACPWF010000013.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_98882, whole genome shotgun sequence 49,503
JACPWF010000014.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_245932, whole genome shotgun sequence 38,849
JACPWF010000015.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_101332, whole genome shotgun sequence 73,711
JACPWF010000016.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_46273, whole genome shotgun sequence 44,542
JACPWF010000017.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_329411, whole genome shotgun sequence 18,453
JACPWF010000018.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_330498, whole genome shotgun sequence 1,000
JACPWF010000019.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_5788, whole genome shotgun sequence 72,072
JACPWF010000020.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_457275, whole genome shotgun sequence 9,939
JACPWF010000021.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_377854, whole genome shotgun sequence 39,117
JACPWF010000022.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_406448, whole genome shotgun sequence 6,898
JACPWF010000023.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_287471, whole genome shotgun sequence 20,110
JACPWF010000024.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_509923, whole genome shotgun sequence 83,890
JACPWF010000025.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_305772, whole genome shotgun sequence 116,005
JACPWF010000026.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_547158, whole genome shotgun sequence 47,750
JACPWF010000027.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_488315, whole genome shotgun sequence 44,236
JACPWF010000028.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_437687, whole genome shotgun sequence 21,704
JACPWF010000029.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_644658, whole genome shotgun sequence 17,126
JACPWF010000030.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_528389, whole genome shotgun sequence 17,595
JACPWF010000031.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_532507, whole genome shotgun sequence 17,528
JACPWF010000032.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_448192, whole genome shotgun sequence 57,713
JACPWF010000033.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_451189, whole genome shotgun sequence 47,151
JACPWF010000034.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_10685, whole genome shotgun sequence 59,547
JACPWF010000035.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_10898, whole genome shotgun sequence 20,188
JACPWF010000036.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_559304, whole genome shotgun sequence 70,328
JACPWF010000037.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_464773, whole genome shotgun sequence 31,815
JACPWF010000038.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_594675, whole genome shotgun sequence 48,580
JACPWF010000039.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_698339, whole genome shotgun sequence 8,870
JACPWF010000040.1 MAG: Candidatus Omnitrophota bacterium isolate NC_groundwater_804_Pr6_B-0.1um_56_12 kurt_kritikos_18_scaffold_743208, whole genome shotgun sequence 5,203

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory