fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACQZI01 sp016207825 NC_groundwater_1563_Pr4_S-0.65um_46_14

Genome identifier: GCA_016207825.1

NCBI assembly name: ASM1620782v1

GTDB taxonomy: Bacteria, Planctomycetota, MHYJ01, JACQXL01, JACQZI01, JACQZI01, JACQZI01 sp016207825

NCBI taxonomy: Bacteria, Planctomycetota

Scaffolds: 42

Genes: 2,497 Protein-coding: 2,430 RNAs: 53 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACQZI010000001.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_122102, whole genome shotgun sequence 29,393
JACQZI010000002.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_51576, whole genome shotgun sequence 52,071
JACQZI010000003.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_32311, whole genome shotgun sequence 59,524
JACQZI010000004.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_11182, whole genome shotgun sequence 23,968
JACQZI010000005.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_28094, whole genome shotgun sequence 201,771
JACQZI010000006.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_7184, whole genome shotgun sequence 55,960
JACQZI010000007.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_75725, whole genome shotgun sequence 324,696
JACQZI010000008.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_113547, whole genome shotgun sequence 319,762
JACQZI010000009.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_112851, whole genome shotgun sequence 13,248
JACQZI010000010.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_137841, whole genome shotgun sequence 235,688
JACQZI010000011.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_138989, whole genome shotgun sequence 113,463
JACQZI010000012.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_71174, whole genome shotgun sequence 81,531
JACQZI010000013.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_72217, whole genome shotgun sequence 10,383
JACQZI010000014.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_65706, whole genome shotgun sequence 67,182
JACQZI010000015.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_129604, whole genome shotgun sequence 7,753
JACQZI010000016.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_170263, whole genome shotgun sequence 18,289
JACQZI010000017.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_50526, whole genome shotgun sequence 97,993
JACQZI010000018.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_161010, whole genome shotgun sequence 82,697
JACQZI010000019.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_181586, whole genome shotgun sequence 19,003
JACQZI010000020.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_189458, whole genome shotgun sequence 10,889
JACQZI010000021.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_263953, whole genome shotgun sequence 4,104
JACQZI010000022.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_298805, whole genome shotgun sequence 60,283
JACQZI010000023.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_326226, whole genome shotgun sequence 197,168
JACQZI010000024.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_332251, whole genome shotgun sequence 16,596
JACQZI010000025.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_254624, whole genome shotgun sequence 51,047
JACQZI010000026.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_274353, whole genome shotgun sequence 41,557
JACQZI010000027.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_178174, whole genome shotgun sequence 131,606
JACQZI010000028.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_356706, whole genome shotgun sequence 11,438
JACQZI010000029.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_364995, whole genome shotgun sequence 51,425
JACQZI010000030.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_366889, whole genome shotgun sequence 57,545
JACQZI010000031.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_307625, whole genome shotgun sequence 30,634
JACQZI010000032.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_380951, whole genome shotgun sequence 52,760
JACQZI010000033.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_483524, whole genome shotgun sequence 15,637
JACQZI010000034.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_476717, whole genome shotgun sequence 21,425
JACQZI010000035.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_525795, whole genome shotgun sequence 11,190
JACQZI010000036.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_509545, whole genome shotgun sequence 16,194
JACQZI010000037.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_513209, whole genome shotgun sequence 53,034
JACQZI010000038.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_635602, whole genome shotgun sequence 94,948
JACQZI010000039.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_631632, whole genome shotgun sequence 63,097
JACQZI010000040.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_690018, whole genome shotgun sequence 25,890
JACQZI010000041.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_737817, whole genome shotgun sequence 35,471
JACQZI010000042.1 MAG: Planctomycetota bacterium isolate NC_groundwater_1563_Pr4_S-0.65um_46_14 SR1-18-Sp65_coassembly_scaffold_778186, whole genome shotgun sequence 17,211

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory