fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACRMN01 sp016214955 NC_groundwater_1908_Pr3_S2p5_74_37

Genome identifier: GCA_016214955.1

NCBI assembly name: ASM1621495v1

GTDB taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales, Anaeromyxobacteraceae, JACRMN01, JACRMN01 sp016214955

NCBI taxonomy: Bacteria, Deltaproteobacteria

Scaffolds: 30

Genes: 4,782 Protein-coding: 4,682 RNAs: 55 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACRMN010000001.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_228, whole genome shotgun sequence 238,667
JACRMN010000002.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_88400, whole genome shotgun sequence 228,275
JACRMN010000003.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_70196, whole genome shotgun sequence 1,165
JACRMN010000004.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_141902, whole genome shotgun sequence 1,268
JACRMN010000005.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_37451, whole genome shotgun sequence 48,276
JACRMN010000006.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_149879, whole genome shotgun sequence 57,687
JACRMN010000007.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_101671, whole genome shotgun sequence 269,283
JACRMN010000008.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_106134, whole genome shotgun sequence 46,257
JACRMN010000009.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_31186, whole genome shotgun sequence 47,702
JACRMN010000010.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_121885, whole genome shotgun sequence 302,414
JACRMN010000011.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_124053, whole genome shotgun sequence 270,640
JACRMN010000012.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_47894, whole genome shotgun sequence 963,043
JACRMN010000013.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_98328, whole genome shotgun sequence 240,820
JACRMN010000014.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_176409, whole genome shotgun sequence 49,173
JACRMN010000015.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_62469, whole genome shotgun sequence 260,067
JACRMN010000016.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_183646, whole genome shotgun sequence 17,191
JACRMN010000017.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_190475, whole genome shotgun sequence 284,879
JACRMN010000018.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_134528, whole genome shotgun sequence 28,306
JACRMN010000019.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_12801, whole genome shotgun sequence 355,847
JACRMN010000020.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_225035, whole genome shotgun sequence 142,860
JACRMN010000021.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_225084, whole genome shotgun sequence 111,191
JACRMN010000022.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_198073, whole genome shotgun sequence 152,688
JACRMN010000023.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_243363, whole genome shotgun sequence 493,299
JACRMN010000024.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_159694, whole genome shotgun sequence 202,210
JACRMN010000025.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_218324, whole genome shotgun sequence 30,880
JACRMN010000026.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_232807, whole genome shotgun sequence 4,661
JACRMN010000027.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_349976, whole genome shotgun sequence 184,882
JACRMN010000028.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_354049, whole genome shotgun sequence 105,314
JACRMN010000029.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_354200, whole genome shotgun sequence 82,592
JACRMN010000030.1 MAG: Deltaproteobacteria bacterium isolate NC_groundwater_1908_Pr3_S2p5_74_37 SR2-18-S2p5_coassembly_scaffold_337190, whole genome shotgun sequence 83,324

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory