fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJCA01 sp016703425 Aved_18-Q3-R54-62_BATAC.150

Genome identifier: GCA_016703425.1

NCBI assembly name: ASM1670342v1

GTDB taxonomy: Bacteria, Myxococcota, Polyangia, Polyangiales, Polyangiaceae, JADJCA01, JADJCA01 sp016703425

NCBI taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales

Scaffolds: 31

Genes: 7,972 Protein-coding: 7,710 RNAs: 77 pseudogenes: 185

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJCA010000001.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00001398-10-14408340, whole genome shotgun sequence 1,442,535
JADJCA010000002.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00002157-10-11800020, whole genome shotgun sequence 1,182,516
JADJCA010000003.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00002188-10-234590, whole genome shotgun sequence 23,144
JADJCA010000004.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00002201-1620-326170, whole genome shotgun sequence 31,884
JADJCA010000005.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00002742-10-180470, whole genome shotgun sequence 18,104
JADJCA010000006.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00002997-10-315590, whole genome shotgun sequence 31,515
JADJCA010000007.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00004541-10-7084310, whole genome shotgun sequence 708,939
JADJCA010000008.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00005295-10-6094160, whole genome shotgun sequence 611,236
JADJCA010000009.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00005363-10-6796090, whole genome shotgun sequence 681,877
JADJCA010000010.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00006358-10-198970, whole genome shotgun sequence 19,920
JADJCA010000011.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00007115-10-4957410, whole genome shotgun sequence 496,200
JADJCA010000012.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00007255-10-4954600, whole genome shotgun sequence 495,994
JADJCA010000013.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00009971-10-4192380, whole genome shotgun sequence 419,736
JADJCA010000014.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00010268-10-231500, whole genome shotgun sequence 23,192
JADJCA010000015.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00010865-10-3492620, whole genome shotgun sequence 345,371
JADJCA010000016.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00011342-10-2727030, whole genome shotgun sequence 272,200
JADJCA010000017.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00015321-10-121120, whole genome shotgun sequence 12,116
JADJCA010000018.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00017722-10-1767940, whole genome shotgun sequence 176,511
JADJCA010000019.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00017932-10-173420, whole genome shotgun sequence 17,298
JADJCA010000020.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00024136-10-240450, whole genome shotgun sequence 24,131
JADJCA010000021.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00025402-10-255080, whole genome shotgun sequence 25,081
JADJCA010000022.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00026542-10-938850, whole genome shotgun sequence 94,040
JADJCA010000023.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00031102-10-1068170, whole genome shotgun sequence 106,862
JADJCA010000024.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00031526-10-932030, whole genome shotgun sequence 93,050
JADJCA010000025.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00041540-10-217750, whole genome shotgun sequence 21,628
JADJCA010000026.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00104018-10-234620, whole genome shotgun sequence 23,472
JADJCA010000027.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00374170-10-1646000, whole genome shotgun sequence 164,716
JADJCA010000028.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00374171-10-75270, whole genome shotgun sequence 7,522
JADJCA010000029.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00374172-10-7285660, whole genome shotgun sequence 727,859
JADJCA010000030.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00374353-10-3812280, whole genome shotgun sequence 381,398
JADJCA010000031.1 MAG: Myxococcales bacterium isolate Aved_18-Q3-R54-62_BATAC.150 tig00375797-10-3426840, whole genome shotgun sequence 343,156

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory