fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJBV01 sp016703535 Aved_18-Q3-R54-62_BAT3C.540

Genome identifier: GCA_016703535.1

NCBI assembly name: ASM1670353v1

GTDB taxonomy: Bacteria, Myxococcota, WYAZ01, WYAZ01, WYAZ01, JADJBV01, JADJBV01 sp016703535

NCBI taxonomy: Bacteria, Deltaproteobacteria

Scaffolds: 2

Genes: 7,865 Protein-coding: 7,754 RNAs: 55 pseudogenes: 56

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJBV010000001.1 MAG: Deltaproteobacteria bacterium isolate Aved_18-Q3-R54-62_BAT3C.540 tig00000023-10-69002250, whole genome shotgun sequence 6,905,894
JADJBV010000002.1 MAG: Deltaproteobacteria bacterium isolate Aved_18-Q3-R54-62_BAT3C.540 tig00000449-10-28489590, whole genome shotgun sequence 2,851,226

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory