fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJAH01 sp016704345 AalW_18-Q3-R10-53_BATAC.340

Genome identifier: GCA_016704345.1

NCBI assembly name: ASM1670434v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, SJA-28, B-1AR, JADJAH01, JADJAH01 sp016704345

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria

Scaffolds: 39

Genes: 4,126 Protein-coding: 3,901 RNAs: 50 pseudogenes: 175

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJAH010000001.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00005253-10-6246180, whole genome shotgun sequence 624,077
JADJAH010000002.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00005387-10-248310, whole genome shotgun sequence 24,802
JADJAH010000003.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00006375-10-5974660, whole genome shotgun sequence 597,169
JADJAH010000004.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00006556-10-163340, whole genome shotgun sequence 16,358
JADJAH010000005.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00006641-10-148120, whole genome shotgun sequence 14,849
JADJAH010000006.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00006871-10-4248180, whole genome shotgun sequence 425,554
JADJAH010000007.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00008184-10-241650, whole genome shotgun sequence 23,590
JADJAH010000008.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00008307-10-127880, whole genome shotgun sequence 12,827
JADJAH010000009.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00008331-10-2757430, whole genome shotgun sequence 276,461
JADJAH010000010.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00009089-10-178390, whole genome shotgun sequence 17,845
JADJAH010000011.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00009839-10-3371360, whole genome shotgun sequence 337,163
JADJAH010000012.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00010426-10-91170, whole genome shotgun sequence 9,145
JADJAH010000013.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00011510-10-2974020, whole genome shotgun sequence 297,086
JADJAH010000014.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00011818-10-218820, whole genome shotgun sequence 21,902
JADJAH010000015.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00012823-10-159660, whole genome shotgun sequence 15,581
JADJAH010000016.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00014187-10-2580840, whole genome shotgun sequence 257,825
JADJAH010000017.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00016202-10-2144980, whole genome shotgun sequence 213,844
JADJAH010000018.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00017200-10-1924390, whole genome shotgun sequence 191,311
JADJAH010000019.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00018380-10-1503740, whole genome shotgun sequence 149,291
JADJAH010000020.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00018463-10-216500, whole genome shotgun sequence 21,692
JADJAH010000021.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00019096-10-217750, whole genome shotgun sequence 21,826
JADJAH010000022.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00020123-10-211560, whole genome shotgun sequence 21,194
JADJAH010000023.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00025362-10-157670, whole genome shotgun sequence 15,118
JADJAH010000024.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00026210-10-825670, whole genome shotgun sequence 82,281
JADJAH010000025.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00036650-10-280440, whole genome shotgun sequence 28,064
JADJAH010000026.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00038145-10-105040, whole genome shotgun sequence 10,375
JADJAH010000027.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00054269-10-404450, whole genome shotgun sequence 40,470
JADJAH010000028.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00068929-10-312600, whole genome shotgun sequence 31,409
JADJAH010000029.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00072674-10-101360, whole genome shotgun sequence 10,144
JADJAH010000030.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00079833-10-262480, whole genome shotgun sequence 26,287
JADJAH010000031.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00097447-10-350490, whole genome shotgun sequence 35,063
JADJAH010000032.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00108303-10-276750, whole genome shotgun sequence 27,433
JADJAH010000033.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00239874-10-109940, whole genome shotgun sequence 10,875
JADJAH010000034.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00406742-10-125500, whole genome shotgun sequence 12,569
JADJAH010000035.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00406744-10-225930, whole genome shotgun sequence 21,882
JADJAH010000036.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00406745-10-124690, whole genome shotgun sequence 12,366
JADJAH010000037.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig00408547-10-1492730, whole genome shotgun sequence 149,372
JADJAH010000038.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig01688609-10-4674160, whole genome shotgun sequence 465,784
JADJAH010000039.1 MAG: Ignavibacteria bacterium isolate AalW_18-Q3-R10-53_BATAC.340 tig01688928-10-105990, whole genome shotgun sequence 10,601

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory