fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADIYM01 sp016705245 AalE_18-Q3-R2-46_BATAC.155

Genome identifier: GCA_016705245.1

NCBI assembly name: ASM1670524v1

GTDB taxonomy: Bacteria, Acidobacteriota, Blastocatellia, UBA7656, JADIYM01, JADIYM01, JADIYM01 sp016705245

NCBI taxonomy: Bacteria, Acidobacteriota, Blastocatellia

Scaffolds: 39

Genes: 4,682 Protein-coding: 4,418 RNAs: 57 pseudogenes: 207

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADIYM010000001.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00002058-10-5276560, whole genome shotgun sequence 531,851
JADIYM010000002.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00002618-10-5131940, whole genome shotgun sequence 516,145
JADIYM010000003.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00002846-10-4841030, whole genome shotgun sequence 484,147
JADIYM010000004.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00003393-10-2890910, whole genome shotgun sequence 288,836
JADIYM010000005.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00003873-10-3436420, whole genome shotgun sequence 344,173
JADIYM010000006.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00003955-10-187750, whole genome shotgun sequence 18,812
JADIYM010000007.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00004422-10-2841030, whole genome shotgun sequence 285,753
JADIYM010000008.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00004429-10-3342400, whole genome shotgun sequence 334,670
JADIYM010000009.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00004595-10-2736850, whole genome shotgun sequence 273,923
JADIYM010000010.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00005700-10-1834200, whole genome shotgun sequence 183,690
JADIYM010000011.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00005904-10-1987390, whole genome shotgun sequence 202,944
JADIYM010000012.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00006476-10-1690370, whole genome shotgun sequence 168,961
JADIYM010000013.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00007099-10-1575190, whole genome shotgun sequence 157,682
JADIYM010000014.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00007289-10-1941860, whole genome shotgun sequence 193,555
JADIYM010000015.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00007824-10-1604290, whole genome shotgun sequence 160,557
JADIYM010000016.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00008397-10-1513720, whole genome shotgun sequence 150,722
JADIYM010000017.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00009240-10-1300820, whole genome shotgun sequence 130,127
JADIYM010000018.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00009438-10-842090, whole genome shotgun sequence 84,388
JADIYM010000019.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00009942-10-862560, whole genome shotgun sequence 86,112
JADIYM010000020.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00010219-10-1312860, whole genome shotgun sequence 131,168
JADIYM010000021.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00010856-10-1090570, whole genome shotgun sequence 109,395
JADIYM010000022.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00012830-10-695250, whole genome shotgun sequence 69,595
JADIYM010000023.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00012903-10-887870, whole genome shotgun sequence 88,440
JADIYM010000024.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00013888-10-241540, whole genome shotgun sequence 23,858
JADIYM010000025.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00016160-10-839190, whole genome shotgun sequence 84,106
JADIYM010000026.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00019889-10-466070, whole genome shotgun sequence 46,690
JADIYM010000027.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00021772-10-527990, whole genome shotgun sequence 52,723
JADIYM010000028.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00024110-10-373910, whole genome shotgun sequence 37,566
JADIYM010000029.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00026389-10-386040, whole genome shotgun sequence 39,051
JADIYM010000030.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00028160-10-332010, whole genome shotgun sequence 33,068
JADIYM010000031.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00040160-10-220810, whole genome shotgun sequence 22,143
JADIYM010000032.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00044491-10-296180, whole genome shotgun sequence 29,368
JADIYM010000033.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00059241-10-219910, whole genome shotgun sequence 22,044
JADIYM010000034.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00168657-10-90320, whole genome shotgun sequence 9,064
JADIYM010000035.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00186927-10-71730, whole genome shotgun sequence 7,202
JADIYM010000036.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00216458-10-52000, whole genome shotgun sequence 5,187
JADIYM010000037.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00237559-10-46570, whole genome shotgun sequence 4,680
JADIYM010000038.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig00250906-10-80390, whole genome shotgun sequence 7,816
JADIYM010000039.1 MAG: Blastocatellia bacterium isolate AalE_18-Q3-R2-46_BATAC.155 tig01009267-10-1484980, whole genome shotgun sequence 150,354

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory