fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJGC01 sp016708315 Bjer_18-Q3-R1-45_MAXAC.225

Genome identifier: GCA_016708315.1

NCBI assembly name: ASM1670831v1

GTDB taxonomy: Bacteria, Zixibacteria, MSB-5A5, CAIYYT01, CAIYYT01, JADJGC01, JADJGC01 sp016708315

NCBI taxonomy: Bacteria

Scaffolds: 25

Genes: 3,529 Protein-coding: 3,400 RNAs: 55 pseudogenes: 74

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJGC010000001.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00001742-10-223050, whole genome shotgun sequence 22,332
JADJGC010000002.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00002390-10-5816310, whole genome shotgun sequence 579,374
JADJGC010000003.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00002583-10-4856050, whole genome shotgun sequence 488,033
JADJGC010000004.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00004712-10-2837300, whole genome shotgun sequence 282,846
JADJGC010000005.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00006499-10-1678920, whole genome shotgun sequence 166,869
JADJGC010000006.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00007657-10-1477610, whole genome shotgun sequence 147,463
JADJGC010000007.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00008020-10-1430460, whole genome shotgun sequence 143,013
JADJGC010000008.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00009405-10-1161610, whole genome shotgun sequence 116,811
JADJGC010000009.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00009573-10-1051060, whole genome shotgun sequence 105,313
JADJGC010000010.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00009850-10-1116990, whole genome shotgun sequence 111,934
JADJGC010000011.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00014786-10-883810, whole genome shotgun sequence 88,281
JADJGC010000012.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00015810-10-349730, whole genome shotgun sequence 34,374
JADJGC010000013.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00016004-10-613610, whole genome shotgun sequence 60,716
JADJGC010000014.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00020790-10-834820, whole genome shotgun sequence 83,534
JADJGC010000015.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00023371-10-744830, whole genome shotgun sequence 74,506
JADJGC010000016.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00024120-10-477030, whole genome shotgun sequence 47,508
JADJGC010000017.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00027367-10-195780, whole genome shotgun sequence 19,667
JADJGC010000018.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00045735-10-99150, whole genome shotgun sequence 10,009
JADJGC010000019.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00056023-10-67030, whole genome shotgun sequence 6,837
JADJGC010000020.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00094669-10-147360, whole genome shotgun sequence 14,865
JADJGC010000021.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00131950-10-91600, whole genome shotgun sequence 9,220
JADJGC010000022.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00172567-10-188460, whole genome shotgun sequence 19,003
JADJGC010000023.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00858069-10-8762140, whole genome shotgun sequence 875,181
JADJGC010000024.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00858217-10-2963900, whole genome shotgun sequence 295,928
JADJGC010000025.1 MAG: bacterium isolate Bjer_18-Q3-R1-45_MAXAC.225 tig00858695-10-688050, whole genome shotgun sequence 68,889

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory