fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJEK01 sp016709145 Aved_18-Q3-R54-62_MAXAC.457

Genome identifier: GCA_016709145.1

NCBI assembly name: ASM1670914v1

GTDB taxonomy: Bacteria, Planctomycetota, B15-G4, B15-G4, JADJEK01, JADJEK01, JADJEK01 sp016709145

NCBI taxonomy: Bacteria, Planctomycetota

Scaffolds: 24

Genes: 4,623 Protein-coding: 4,498 RNAs: 54 pseudogenes: 71

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJEK010000001.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00001345-10-15073840, whole genome shotgun sequence 1,508,603
JADJEK010000002.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00003265-10-8357350, whole genome shotgun sequence 836,781
JADJEK010000003.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00005478-10-134690, whole genome shotgun sequence 13,486
JADJEK010000004.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00008446-10-3686780, whole genome shotgun sequence 369,506
JADJEK010000005.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00010056-10-4139320, whole genome shotgun sequence 413,404
JADJEK010000006.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00010111-10-3588810, whole genome shotgun sequence 358,962
JADJEK010000007.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00011029-10-3302090, whole genome shotgun sequence 332,456
JADJEK010000008.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00012216-10-1799390, whole genome shotgun sequence 180,147
JADJEK010000009.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00013573-10-2892410, whole genome shotgun sequence 289,548
JADJEK010000010.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00015310-10-1795720, whole genome shotgun sequence 179,792
JADJEK010000011.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00016999-10-1737560, whole genome shotgun sequence 174,006
JADJEK010000012.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00017533-10-2086550, whole genome shotgun sequence 208,821
JADJEK010000013.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00022140-10-1429670, whole genome shotgun sequence 143,204
JADJEK010000014.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00022188-10-1234150, whole genome shotgun sequence 123,675
JADJEK010000015.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00031523-10-994560, whole genome shotgun sequence 99,655
JADJEK010000016.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00039248-10-592920, whole genome shotgun sequence 59,382
JADJEK010000017.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00046468-10-419460, whole genome shotgun sequence 42,039
JADJEK010000018.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00046742-10-570690, whole genome shotgun sequence 57,165
JADJEK010000019.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00052893-10-299270, whole genome shotgun sequence 29,999
JADJEK010000020.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00054675-10-137140, whole genome shotgun sequence 13,726
JADJEK010000021.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00058277-10-430760, whole genome shotgun sequence 43,112
JADJEK010000022.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00132955-10-107780, whole genome shotgun sequence 10,912
JADJEK010000023.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig00157028-10-77010, whole genome shotgun sequence 7,778
JADJEK010000024.1 MAG: Planctomycetota bacterium isolate Aved_18-Q3-R54-62_MAXAC.457 tig01608361-10-3959370, whole genome shotgun sequence 396,392

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory