fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJEI01 sp016709155 Aved_18-Q3-R54-62_MAXAC.426

Genome identifier: GCA_016709155.1

NCBI assembly name: ASM1670915v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, Ignavibacteriales, Ignavibacteriaceae, JADJEI01, JADJEI01 sp016709155

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria, Ignavibacteriales

Scaffolds: 14

Genes: 3,920 Protein-coding: 3,621 RNAs: 54 pseudogenes: 245

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJEI010000001.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00000810-10-20805710, whole genome shotgun sequence 2,080,515
JADJEI010000002.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00000813-10-251870, whole genome shotgun sequence 25,083
JADJEI010000003.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00000816-10-278730, whole genome shotgun sequence 27,933
JADJEI010000004.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00000820-10-192470, whole genome shotgun sequence 18,967
JADJEI010000005.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00001221-10-303880, whole genome shotgun sequence 30,243
JADJEI010000006.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00007817-10-4213050, whole genome shotgun sequence 420,933
JADJEI010000007.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00016960-10-163960, whole genome shotgun sequence 16,439
JADJEI010000008.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00017051-10-179580, whole genome shotgun sequence 17,948
JADJEI010000009.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00047273-10-200480, whole genome shotgun sequence 19,841
JADJEI010000010.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00244946-10-97500, whole genome shotgun sequence 9,810
JADJEI010000011.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00326479-10-39410, whole genome shotgun sequence 3,697
JADJEI010000012.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00373849-10-355690, whole genome shotgun sequence 35,350
JADJEI010000013.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig00373850-10-11192540, whole genome shotgun sequence 1,119,086
JADJEI010000014.1 MAG: Ignavibacteriales bacterium isolate Aved_18-Q3-R54-62_MAXAC.426 tig01608811-10-1817890, whole genome shotgun sequence 181,642

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory