fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA2033 sp016711485 Hade_18-Q3-R52-61_MAXAC.192

Genome identifier: GCA_016711485.1

NCBI assembly name: ASM1671148v1

GTDB taxonomy: Bacteria, Spirochaetota, Leptospirae, Leptospirales, Leptospiraceae, UBA2033, UBA2033 sp016711485

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Leptospirales, Leptospiraceae

Scaffolds: 34

Genes: 6,052 Protein-coding: 5,892 RNAs: 50 pseudogenes: 110

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJSX010000001.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00000163-10-400490, whole genome shotgun sequence 40,105
JADJSX010000002.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00000167-10-101140, whole genome shotgun sequence 9,704
JADJSX010000003.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00000169-10-173350, whole genome shotgun sequence 17,379
JADJSX010000004.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00000172-10-165340, whole genome shotgun sequence 16,558
JADJSX010000005.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00000177-10-79270, whole genome shotgun sequence 7,732
JADJSX010000006.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00000528-10-9828800, whole genome shotgun sequence 984,325
JADJSX010000007.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00000719-10-3697200, whole genome shotgun sequence 369,786
JADJSX010000008.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00001510-10-5310450, whole genome shotgun sequence 531,951
JADJSX010000009.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00001532-10-3203730, whole genome shotgun sequence 320,535
JADJSX010000010.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00003726-10-55120, whole genome shotgun sequence 5,511
JADJSX010000011.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00003735-10-185550, whole genome shotgun sequence 18,566
JADJSX010000012.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00004611-10-106140, whole genome shotgun sequence 10,608
JADJSX010000013.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00008279-10-2311730, whole genome shotgun sequence 231,548
JADJSX010000014.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00013096-10-1459290, whole genome shotgun sequence 146,183
JADJSX010000015.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00017178-10-575960, whole genome shotgun sequence 57,596
JADJSX010000016.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00020148-10-97880, whole genome shotgun sequence 9,515
JADJSX010000017.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00026646-10-255260, whole genome shotgun sequence 25,559
JADJSX010000018.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00056682-10-78920, whole genome shotgun sequence 7,928
JADJSX010000019.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00081705-10-154460, whole genome shotgun sequence 15,524
JADJSX010000020.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00146732-10-46120, whole genome shotgun sequence 4,649
JADJSX010000021.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00406275-10-482550, whole genome shotgun sequence 48,058
JADJSX010000022.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00406276-10-224210, whole genome shotgun sequence 22,430
JADJSX010000023.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00406277-10-16710610, whole genome shotgun sequence 1,672,613
JADJSX010000024.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00406517-10-5467300, whole genome shotgun sequence 547,834
JADJSX010000025.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00406519-10-4514920, whole genome shotgun sequence 451,327
JADJSX010000026.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00406565-10-470900, whole genome shotgun sequence 46,793
JADJSX010000027.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00406567-10-59550, whole genome shotgun sequence 5,963
JADJSX010000028.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00406613-10-204550, whole genome shotgun sequence 20,472
JADJSX010000029.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00406614-10-2497600, whole genome shotgun sequence 250,093
JADJSX010000030.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00407392-10-126180, whole genome shotgun sequence 12,609
JADJSX010000031.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00407393-10-2522910, whole genome shotgun sequence 252,501
JADJSX010000032.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig00407608-10-563970, whole genome shotgun sequence 56,413
JADJSX010000033.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig01674406-10-70850, whole genome shotgun sequence 7,085
JADJSX010000034.1 MAG: Leptospiraceae bacterium isolate Hade_18-Q3-R52-61_MAXAC.192 tig01674573-10-2305340, whole genome shotgun sequence 230,886

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory