fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJRK01 sp016712285 Fred_18-Q3-R57-64_MAXAC.456

Genome identifier: GCA_016712285.1

NCBI assembly name: ASM1671228v1

GTDB taxonomy: Bacteria, Planctomycetota, UBA8742, UBA2392, UBA2392, JADJRK01, JADJRK01 sp016712285

NCBI taxonomy: Bacteria, Planctomycetota

Scaffolds: 3

Genes: 3,515 Protein-coding: 3,418 RNAs: 78 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJRK010000001.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_MAXAC.456 tig00000287-10-41217550, whole genome shotgun sequence 4,122,760
JADJRK010000002.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_MAXAC.456 tig00152177-10-119850, whole genome shotgun sequence 11,988
JADJRK010000003.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_MAXAC.456 tig01548261-10-345520, whole genome shotgun sequence 34,422

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory