fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJRG01 sp016712315 Fred_18-Q3-R57-64_MAXAC.384

Genome identifier: GCA_016712315.1

NCBI assembly name: ASM1671231v1

GTDB taxonomy: Bacteria, Myxococcota, Polyangia, Nannocystales, Nannocystaceae, JADJRG01, JADJRG01 sp016712315

NCBI taxonomy: Bacteria, Myxococcota, Nannocystales, Nannocystaceae, Nannocystis

Scaffolds: 31

Genes: 7,248 Protein-coding: 7,043 RNAs: 61 pseudogenes: 144

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJRG010000001.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00000428-10-413140, whole genome shotgun sequence 41,114
JADJRG010000002.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00000430-10-227940, whole genome shotgun sequence 22,802
JADJRG010000003.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00000510-10-353460, whole genome shotgun sequence 35,384
JADJRG010000004.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00000528-10-508550, whole genome shotgun sequence 50,875
JADJRG010000005.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00000729-10-461620, whole genome shotgun sequence 45,916
JADJRG010000006.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00000774-10-421660, whole genome shotgun sequence 42,172
JADJRG010000007.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00001050-10-667650, whole genome shotgun sequence 66,799
JADJRG010000008.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00004413-10-620040, whole genome shotgun sequence 62,044
JADJRG010000009.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00007461-10-275140, whole genome shotgun sequence 27,484
JADJRG010000010.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00023499-10-644400, whole genome shotgun sequence 64,502
JADJRG010000011.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00023539-10-566000, whole genome shotgun sequence 56,494
JADJRG010000012.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00042373-10-187990, whole genome shotgun sequence 18,363
JADJRG010000013.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350862-10-28537670, whole genome shotgun sequence 2,855,547
JADJRG010000014.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350863-10-477030, whole genome shotgun sequence 47,389
JADJRG010000015.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350864-10-2195080, whole genome shotgun sequence 219,659
JADJRG010000016.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350865-10-338050, whole genome shotgun sequence 33,510
JADJRG010000017.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350866-10-8237910, whole genome shotgun sequence 824,065
JADJRG010000018.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350867-10-489310, whole genome shotgun sequence 48,932
JADJRG010000019.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350868-10-2202090, whole genome shotgun sequence 220,095
JADJRG010000020.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350869-10-379210, whole genome shotgun sequence 37,506
JADJRG010000021.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350870-10-836380, whole genome shotgun sequence 83,638
JADJRG010000022.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350881-10-11703410, whole genome shotgun sequence 1,171,249
JADJRG010000023.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350885-10-3193320, whole genome shotgun sequence 319,542
JADJRG010000024.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350887-10-561960, whole genome shotgun sequence 55,999
JADJRG010000025.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350939-10-755460, whole genome shotgun sequence 75,599
JADJRG010000026.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350941-10-2204620, whole genome shotgun sequence 220,370
JADJRG010000027.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350973-10-837650, whole genome shotgun sequence 83,784
JADJRG010000028.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350976-10-3571600, whole genome shotgun sequence 357,321
JADJRG010000029.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00350978-10-11289450, whole genome shotgun sequence 1,129,133
JADJRG010000030.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00351098-10-544990, whole genome shotgun sequence 54,332
JADJRG010000031.1 MAG: Nannocystis sp. isolate Fred_18-Q3-R57-64_MAXAC.384 tig00351962-10-2075360, whole genome shotgun sequence 207,650

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory