fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJRH01 sp016712345 Fred_18-Q3-R57-64_MAXAC.407

Genome identifier: GCA_016712345.1

NCBI assembly name: ASM1671234v1

GTDB taxonomy: Bacteria, Myxococcota, Polyangia, Polyangiales, Polyangiaceae, JADJRH01, JADJRH01 sp016712345

NCBI taxonomy: Bacteria, Myxococcota, Polyangiales, Polyangiaceae

Scaffolds: 11

Genes: 8,914 Protein-coding: 8,685 RNAs: 61 pseudogenes: 168

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJRH010000001.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00000220-10-52028170, whole genome shotgun sequence 5,207,891
JADJRH010000002.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00003997-10-7377910, whole genome shotgun sequence 738,087
JADJRH010000003.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00027832-10-463900, whole genome shotgun sequence 46,380
JADJRH010000004.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00030706-10-173720, whole genome shotgun sequence 17,409
JADJRH010000005.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00070497-10-156820, whole genome shotgun sequence 15,749
JADJRH010000006.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00088933-10-263600, whole genome shotgun sequence 26,428
JADJRH010000007.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00116059-10-59000, whole genome shotgun sequence 5,935
JADJRH010000008.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00267020-10-44700, whole genome shotgun sequence 4,315
JADJRH010000009.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00350859-10-383390, whole genome shotgun sequence 38,419
JADJRH010000010.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00350860-10-136000, whole genome shotgun sequence 13,370
JADJRH010000011.1 MAG: Polyangiaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.407 tig00350861-10-53847230, whole genome shotgun sequence 5,390,629

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory