fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJQN01 sp016712745 Fred_18-Q3-R57-64_MAXAC.276

Genome identifier: GCA_016712745.1

NCBI assembly name: ASM1671274v1

GTDB taxonomy: Bacteria, Myxococcota, Polyangia, Polyangiales, JADJQN01, JADJQN01, JADJQN01 sp016712745

NCBI taxonomy: Bacteria, Myxococcota, Polyangiales, Sandaracinaceae

Scaffolds: 17

Genes: 5,149 Protein-coding: 5,011 RNAs: 54 pseudogenes: 84

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJQN010000001.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00000756-10-19749050, whole genome shotgun sequence 1,976,722
JADJQN010000002.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00001039-10-445910, whole genome shotgun sequence 44,624
JADJQN010000003.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00001056-10-18270440, whole genome shotgun sequence 1,821,274
JADJQN010000004.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00004596-10-5838700, whole genome shotgun sequence 584,321
JADJQN010000005.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00004660-10-133340, whole genome shotgun sequence 13,348
JADJQN010000006.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00012501-10-1883840, whole genome shotgun sequence 188,658
JADJQN010000007.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00037578-10-478120, whole genome shotgun sequence 47,746
JADJQN010000008.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00049844-10-122170, whole genome shotgun sequence 12,247
JADJQN010000009.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00051224-10-280740, whole genome shotgun sequence 27,916
JADJQN010000010.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00054173-10-247820, whole genome shotgun sequence 24,687
JADJQN010000011.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00077156-10-193050, whole genome shotgun sequence 19,307
JADJQN010000012.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00141662-10-95050, whole genome shotgun sequence 9,535
JADJQN010000013.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00155644-10-82780, whole genome shotgun sequence 8,313
JADJQN010000014.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00282172-10-51980, whole genome shotgun sequence 4,702
JADJQN010000015.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig00350877-10-9424140, whole genome shotgun sequence 942,804
JADJQN010000016.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig01546705-10-549410, whole genome shotgun sequence 55,005
JADJQN010000017.1 MAG: Sandaracinaceae bacterium isolate Fred_18-Q3-R57-64_MAXAC.276 tig01546706-10-100620, whole genome shotgun sequence 10,105

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory