fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJPQ01 sp016713175 Fred_18-Q3-R57-64_BATAC.530

Genome identifier: GCA_016713175.1

NCBI assembly name: ASM1671317v1

GTDB taxonomy: Bacteria, Planctomycetota, UBA1135, UBA2386, UBA2386, JADJPQ01, JADJPQ01 sp016713175

NCBI taxonomy: Bacteria, Planctomycetota

Scaffolds: 31

Genes: 6,394 Protein-coding: 6,265 RNAs: 58 pseudogenes: 71

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJPQ010000001.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00002018-10-12358610, whole genome shotgun sequence 1,237,637
JADJPQ010000002.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00003375-10-8720580, whole genome shotgun sequence 872,554
JADJPQ010000003.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00004105-10-6725890, whole genome shotgun sequence 673,513
JADJPQ010000004.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00004236-10-6998990, whole genome shotgun sequence 700,437
JADJPQ010000005.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00004339-10-91020, whole genome shotgun sequence 9,160
JADJPQ010000006.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00006169-10-1455690, whole genome shotgun sequence 145,673
JADJPQ010000007.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00006567-10-4538980, whole genome shotgun sequence 454,652
JADJPQ010000008.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00007158-10-4787660, whole genome shotgun sequence 479,086
JADJPQ010000009.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00007322-10-4181700, whole genome shotgun sequence 418,627
JADJPQ010000010.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00007625-10-122610, whole genome shotgun sequence 12,109
JADJPQ010000011.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00009030-10-3011700, whole genome shotgun sequence 300,914
JADJPQ010000012.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00009034-10-3400310, whole genome shotgun sequence 340,324
JADJPQ010000013.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00010489-10-2539330, whole genome shotgun sequence 254,228
JADJPQ010000014.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00015547-10-1807470, whole genome shotgun sequence 180,015
JADJPQ010000015.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00020139-10-1078840, whole genome shotgun sequence 107,952
JADJPQ010000016.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00020895-10-1043970, whole genome shotgun sequence 104,600
JADJPQ010000017.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00021883-10-150330, whole genome shotgun sequence 15,092
JADJPQ010000018.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00024974-10-773520, whole genome shotgun sequence 77,474
JADJPQ010000019.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00028400-10-597230, whole genome shotgun sequence 60,323
JADJPQ010000020.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00034092-10-102310, whole genome shotgun sequence 10,240
JADJPQ010000021.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00037824-10-368910, whole genome shotgun sequence 37,008
JADJPQ010000022.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00040289-10-490540, whole genome shotgun sequence 48,944
JADJPQ010000023.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00046282-10-141920, whole genome shotgun sequence 14,251
JADJPQ010000024.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00059221-10-158730, whole genome shotgun sequence 15,894
JADJPQ010000025.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00334391-10-84580, whole genome shotgun sequence 8,475
JADJPQ010000026.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00351956-10-5408960, whole genome shotgun sequence 540,864
JADJPQ010000027.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00351958-10-1351840, whole genome shotgun sequence 135,133
JADJPQ010000028.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00352522-10-1662440, whole genome shotgun sequence 166,382
JADJPQ010000029.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig00352524-10-2390620, whole genome shotgun sequence 239,115
JADJPQ010000030.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig01547007-10-2759510, whole genome shotgun sequence 276,334
JADJPQ010000031.1 MAG: Planctomycetota bacterium isolate Fred_18-Q3-R57-64_BATAC.530 tig01554627-10-127950, whole genome shotgun sequence 12,824

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory