fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA2353 sp002344005 Fred_18-Q3-R57-64_BATAC.298

Genome identifier: GCA_016713455.1

NCBI assembly name: ASM1671345v1

GTDB taxonomy: Bacteria, Bacteroidota, Kapaibacteriia, Kapaibacteriales, UBA961, UBA2353, UBA2353 sp002344005

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria

Scaffolds: 16

Genes: 3,591 Protein-coding: 3,413 RNAs: 46 pseudogenes: 132

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJPC010000001.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00004177-10-7208320, whole genome shotgun sequence 719,490
JADJPC010000002.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00004188-10-6683710, whole genome shotgun sequence 667,996
JADJPC010000003.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00004315-10-7758630, whole genome shotgun sequence 775,928
JADJPC010000004.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00005064-10-145200, whole genome shotgun sequence 14,427
JADJPC010000005.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00006970-10-5013880, whole genome shotgun sequence 501,957
JADJPC010000006.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00009184-10-2692980, whole genome shotgun sequence 269,516
JADJPC010000007.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00009646-10-251740, whole genome shotgun sequence 24,598
JADJPC010000008.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00010135-10-2769620, whole genome shotgun sequence 276,906
JADJPC010000009.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00010770-10-2762280, whole genome shotgun sequence 276,102
JADJPC010000010.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00026584-10-379840, whole genome shotgun sequence 37,768
JADJPC010000011.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00030166-10-211890, whole genome shotgun sequence 21,218
JADJPC010000012.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00055132-10-204690, whole genome shotgun sequence 20,224
JADJPC010000013.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00074159-10-148290, whole genome shotgun sequence 14,866
JADJPC010000014.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00108163-10-270720, whole genome shotgun sequence 27,104
JADJPC010000015.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00345106-10-72070, whole genome shotgun sequence 7,225
JADJPC010000016.1 MAG: Ignavibacteria bacterium isolate Fred_18-Q3-R57-64_BATAC.298 tig00352048-10-4301620, whole genome shotgun sequence 430,238

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory