fast.genomicscompare 6,575 genera of bacteria & archaea

 

GCA-2746605 sp016713565 Fred_18-Q3-R57-64_BATAC.232

Genome identifier: GCA_016713565.1

NCBI assembly name: ASM1671356v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, Ignavibacteriales, Melioribacteraceae, GCA-2746605, GCA-2746605 sp016713565

NCBI taxonomy: Bacteria, Ignavibacteriota

Scaffolds: 8

Genes: 3,746 Protein-coding: 3,599 RNAs: 50 pseudogenes: 97

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJOX010000001.1 MAG: Ignavibacteriae bacterium isolate Fred_18-Q3-R57-64_BATAC.232 tig00002816-10-5380590, whole genome shotgun sequence 538,261
JADJOX010000002.1 MAG: Ignavibacteriae bacterium isolate Fred_18-Q3-R57-64_BATAC.232 tig00003519-10-1580850, whole genome shotgun sequence 158,192
JADJOX010000003.1 MAG: Ignavibacteriae bacterium isolate Fred_18-Q3-R57-64_BATAC.232 tig00006739-10-4048450, whole genome shotgun sequence 404,417
JADJOX010000004.1 MAG: Ignavibacteriae bacterium isolate Fred_18-Q3-R57-64_BATAC.232 tig00006809-10-534210, whole genome shotgun sequence 53,502
JADJOX010000005.1 MAG: Ignavibacteriae bacterium isolate Fred_18-Q3-R57-64_BATAC.232 tig00008044-10-3549520, whole genome shotgun sequence 354,846
JADJOX010000006.1 MAG: Ignavibacteriae bacterium isolate Fred_18-Q3-R57-64_BATAC.232 tig00014919-10-1816030, whole genome shotgun sequence 181,804
JADJOX010000007.1 MAG: Ignavibacteriae bacterium isolate Fred_18-Q3-R57-64_BATAC.232 tig01546570-10-16711050, whole genome shotgun sequence 1,671,533
JADJOX010000008.1 MAG: Ignavibacteriae bacterium isolate Fred_18-Q3-R57-64_BATAC.232 tig01546639-10-9265310, whole genome shotgun sequence 926,914

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory