fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAEUJP01 sp016714225 EsbW_18-Q3-R4-48_MAXAC.252

Genome identifier: GCA_016714225.1

NCBI assembly name: ASM1671422v1

GTDB taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales, Myxococcaceae, JAEUJP01, JAEUJP01 sp016714225

NCBI taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales, Archangiaceae

Scaffolds: 48

Genes: 8,849 Protein-coding: 8,495 RNAs: 59 pseudogenes: 295

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJNS010000001.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00002726-10-7724280, whole genome shotgun sequence 773,192
JADJNS010000002.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00002767-10-228960, whole genome shotgun sequence 22,921
JADJNS010000003.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00002781-10-7301030, whole genome shotgun sequence 731,661
JADJNS010000004.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00003030-10-7341760, whole genome shotgun sequence 733,767
JADJNS010000005.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00003274-10-6217080, whole genome shotgun sequence 622,475
JADJNS010000006.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00003489-10-6524540, whole genome shotgun sequence 652,915
JADJNS010000007.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00004134-10-5056540, whole genome shotgun sequence 505,917
JADJNS010000008.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00004283-10-4772870, whole genome shotgun sequence 477,493
JADJNS010000009.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00004804-10-3608510, whole genome shotgun sequence 361,766
JADJNS010000010.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00005660-10-4060250, whole genome shotgun sequence 407,789
JADJNS010000011.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00005672-10-563810, whole genome shotgun sequence 56,315
JADJNS010000012.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00005803-10-4080380, whole genome shotgun sequence 408,380
JADJNS010000013.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00005984-10-287500, whole genome shotgun sequence 28,769
JADJNS010000014.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00006079-10-3564250, whole genome shotgun sequence 351,103
JADJNS010000015.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00006091-10-159210, whole genome shotgun sequence 15,266
JADJNS010000016.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00006165-10-214590, whole genome shotgun sequence 21,231
JADJNS010000017.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00006353-10-247780, whole genome shotgun sequence 24,757
JADJNS010000018.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00006834-10-3531540, whole genome shotgun sequence 354,150
JADJNS010000019.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00006881-10-3195620, whole genome shotgun sequence 319,991
JADJNS010000020.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00007114-10-2937120, whole genome shotgun sequence 294,469
JADJNS010000021.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00008052-10-2694790, whole genome shotgun sequence 269,780
JADJNS010000022.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00008575-10-2610060, whole genome shotgun sequence 260,451
JADJNS010000023.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00008830-10-2373760, whole genome shotgun sequence 237,742
JADJNS010000024.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00009658-10-174900, whole genome shotgun sequence 17,497
JADJNS010000025.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00010230-10-1882520, whole genome shotgun sequence 188,665
JADJNS010000026.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00010594-10-2163480, whole genome shotgun sequence 217,966
JADJNS010000027.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00012604-10-1883260, whole genome shotgun sequence 188,625
JADJNS010000028.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00013247-10-1090380, whole genome shotgun sequence 109,299
JADJNS010000029.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00013605-10-1327290, whole genome shotgun sequence 132,893
JADJNS010000030.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00013663-10-513470, whole genome shotgun sequence 51,735
JADJNS010000031.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00013860-10-1239850, whole genome shotgun sequence 124,078
JADJNS010000032.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00013980-10-214230, whole genome shotgun sequence 21,340
JADJNS010000033.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00014792-10-297920, whole genome shotgun sequence 30,103
JADJNS010000034.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00015089-10-1282740, whole genome shotgun sequence 128,542
JADJNS010000035.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00016962-10-875630, whole genome shotgun sequence 87,886
JADJNS010000036.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00018538-10-844380, whole genome shotgun sequence 84,693
JADJNS010000037.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00018559-10-983080, whole genome shotgun sequence 98,367
JADJNS010000038.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00018613-10-990170, whole genome shotgun sequence 100,121
JADJNS010000039.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00019465-10-943640, whole genome shotgun sequence 94,649
JADJNS010000040.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00020066-10-572220, whole genome shotgun sequence 57,311
JADJNS010000041.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00021296-10-730150, whole genome shotgun sequence 73,435
JADJNS010000042.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00023325-10-588240, whole genome shotgun sequence 58,965
JADJNS010000043.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00048187-10-468900, whole genome shotgun sequence 47,636
JADJNS010000044.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00056216-10-193000, whole genome shotgun sequence 19,395
JADJNS010000045.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00063225-10-342600, whole genome shotgun sequence 33,954
JADJNS010000046.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig00088082-10-159370, whole genome shotgun sequence 15,964
JADJNS010000047.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig01102384-10-363180, whole genome shotgun sequence 37,278
JADJNS010000048.1 MAG: Archangiaceae bacterium isolate EsbW_18-Q3-R4-48_MAXAC.252 tig01102409-10-1815990, whole genome shotgun sequence 181,750

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory