fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJWH01 sp016716465 Kalu_18-Q3-R12-55_BAT3C.208

Genome identifier: GCA_016716465.1

NCBI assembly name: ASM1671646v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, JADJWH01, JADJWH01, JADJWH01, JADJWH01 sp016716465

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria

Scaffolds: 8

Genes: 2,852 Protein-coding: 2,759 RNAs: 51 pseudogenes: 42

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJWH010000001.1 MAG: Gammaproteobacteria bacterium isolate Kalu_18-Q3-R12-55_BAT3C.208 tig00000943-10-15208620, whole genome shotgun sequence 1,521,596
JADJWH010000002.1 MAG: Gammaproteobacteria bacterium isolate Kalu_18-Q3-R12-55_BAT3C.208 tig00001049-10-390910, whole genome shotgun sequence 39,056
JADJWH010000003.1 MAG: Gammaproteobacteria bacterium isolate Kalu_18-Q3-R12-55_BAT3C.208 tig00001059-10-367630, whole genome shotgun sequence 36,833
JADJWH010000004.1 MAG: Gammaproteobacteria bacterium isolate Kalu_18-Q3-R12-55_BAT3C.208 tig00001614-10-6554840, whole genome shotgun sequence 656,383
JADJWH010000005.1 MAG: Gammaproteobacteria bacterium isolate Kalu_18-Q3-R12-55_BAT3C.208 tig00002931-10-3150140, whole genome shotgun sequence 315,344
JADJWH010000006.1 MAG: Gammaproteobacteria bacterium isolate Kalu_18-Q3-R12-55_BAT3C.208 tig00004007-10-2160740, whole genome shotgun sequence 216,343
JADJWH010000007.1 MAG: Gammaproteobacteria bacterium isolate Kalu_18-Q3-R12-55_BAT3C.208 tig00004492-10-2261190, whole genome shotgun sequence 226,430
JADJWH010000008.1 MAG: Gammaproteobacteria bacterium isolate Kalu_18-Q3-R12-55_BAT3C.208 tig00004834-10-99770, whole genome shotgun sequence 10,009

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory