fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJWG01 sp016716475 Kalu_18-Q3-R12-55_BAT3C.197

Genome identifier: GCA_016716475.1

NCBI assembly name: ASM1671647v1

GTDB taxonomy: Bacteria, Planctomycetota, Phycisphaerae, UBA1845, Fen-1342, JADJWG01, JADJWG01 sp016716475

NCBI taxonomy: Bacteria, Planctomycetota, Phycisphaerae, Phycisphaerales

Scaffolds: 4

Genes: 3,611 Protein-coding: 3,508 RNAs: 54 pseudogenes: 49

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJWG010000001.1 MAG: Phycisphaerales bacterium isolate Kalu_18-Q3-R12-55_BAT3C.197 tig00000698-10-18309200, whole genome shotgun sequence 1,838,652
JADJWG010000002.1 MAG: Phycisphaerales bacterium isolate Kalu_18-Q3-R12-55_BAT3C.197 tig00000838-10-15342620, whole genome shotgun sequence 1,540,798
JADJWG010000003.1 MAG: Phycisphaerales bacterium isolate Kalu_18-Q3-R12-55_BAT3C.197 tig00000858-10-161770, whole genome shotgun sequence 16,224
JADJWG010000004.1 MAG: Phycisphaerales bacterium isolate Kalu_18-Q3-R12-55_BAT3C.197 tig00001219-10-9817650, whole genome shotgun sequence 986,248

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory