fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJUW01 sp016716835 Hirt_18-Q3-R61-65_MAXAC.229

Genome identifier: GCA_016716835.1

NCBI assembly name: ASM1671683v1

GTDB taxonomy: Bacteria, Myxococcota, Polyangia, Haliangiales, Haliangiaceae, JADJUW01, JADJUW01 sp016716835

NCBI taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales

Scaffolds: 8

Genes: 4,101 Protein-coding: 3,971 RNAs: 55 pseudogenes: 75

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJUW010000001.1 MAG: Myxococcales bacterium isolate Hirt_18-Q3-R61-65_MAXAC.229 tig00000107-10-33104080, whole genome shotgun sequence 3,314,312
JADJUW010000002.1 MAG: Myxococcales bacterium isolate Hirt_18-Q3-R61-65_MAXAC.229 tig00001987-10-8939330, whole genome shotgun sequence 894,866
JADJUW010000003.1 MAG: Myxococcales bacterium isolate Hirt_18-Q3-R61-65_MAXAC.229 tig00008943-10-2562490, whole genome shotgun sequence 256,369
JADJUW010000004.1 MAG: Myxococcales bacterium isolate Hirt_18-Q3-R61-65_MAXAC.229 tig00041497-10-206700, whole genome shotgun sequence 20,707
JADJUW010000005.1 MAG: Myxococcales bacterium isolate Hirt_18-Q3-R61-65_MAXAC.229 tig00041650-10-400580, whole genome shotgun sequence 40,059
JADJUW010000006.1 MAG: Myxococcales bacterium isolate Hirt_18-Q3-R61-65_MAXAC.229 tig00085089-10-286750, whole genome shotgun sequence 28,761
JADJUW010000007.1 MAG: Myxococcales bacterium isolate Hirt_18-Q3-R61-65_MAXAC.229 tig00138606-10-44050, whole genome shotgun sequence 4,432
JADJUW010000008.1 MAG: Myxococcales bacterium isolate Hirt_18-Q3-R61-65_MAXAC.229 tig00150215-10-80940, whole genome shotgun sequence 8,156

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory