fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADKCZ01 sp016718565 OdNW_18-Q3-R42-56_BAT3C.134_sub

Genome identifier: GCA_016718565.1

NCBI assembly name: ASM1671856v1

GTDB taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales, Anaeromyxobacteraceae, JADKCZ01, JADKCZ01 sp016718565

NCBI taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales, Anaeromyxobacteraceae, Anaeromyxobacter

Scaffolds: 18

Genes: 4,485 Protein-coding: 4,290 RNAs: 55 pseudogenes: 140

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADKCZ010000001.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00000032-10-15659720, whole genome shotgun sequence 1,568,185
JADKCZ010000002.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00000049-10-7664370, whole genome shotgun sequence 767,573
JADKCZ010000003.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00000066-10-5397680, whole genome shotgun sequence 540,482
JADKCZ010000004.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00000137-10-149040, whole genome shotgun sequence 14,956
JADKCZ010000005.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00000459-10-6595030, whole genome shotgun sequence 659,915
JADKCZ010000006.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00000617-10-193570, whole genome shotgun sequence 19,429
JADKCZ010000007.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00000788-10-124090, whole genome shotgun sequence 12,333
JADKCZ010000008.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00001295-10-2689100, whole genome shotgun sequence 269,098
JADKCZ010000009.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00001354-10-186840, whole genome shotgun sequence 18,738
JADKCZ010000010.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00001608-10-2831530, whole genome shotgun sequence 283,352
JADKCZ010000011.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00002237-10-103320, whole genome shotgun sequence 10,265
JADKCZ010000012.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00004916-10-87590, whole genome shotgun sequence 8,774
JADKCZ010000013.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00007421-10-1309860, whole genome shotgun sequence 131,277
JADKCZ010000014.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00009616-10-535830, whole genome shotgun sequence 53,672
JADKCZ010000015.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00016679-10-318930, whole genome shotgun sequence 31,993
JADKCZ010000016.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00896691-10-97030, whole genome shotgun sequence 9,757
JADKCZ010000017.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00896696-10-229390, whole genome shotgun sequence 22,995
JADKCZ010000018.1 MAG: Anaeromyxobacter sp. isolate OdNW_18-Q3-R42-56_BAT3C.134_sub tig00896697-10-7947920, whole genome shotgun sequence 794,108

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory