fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJYJ01 sp016719785 Lyne_18-Q3-R50-59_BATAC.272

Genome identifier: GCA_016719785.1

NCBI assembly name: ASM1671978v1

GTDB taxonomy: Bacteria, Chloroflexota, Anaerolineae, SSC4, SSC4, JADJYJ01, JADJYJ01 sp016719785

NCBI taxonomy: Bacteria, Chloroflexota, Anaerolineae

Scaffolds: 35

Genes: 5,573 Protein-coding: 5,328 RNAs: 59 pseudogenes: 186

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJYJ010000001.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00002996-10-7735400, whole genome shotgun sequence 775,720
JADJYJ010000002.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00003017-10-192110, whole genome shotgun sequence 19,157
JADJYJ010000003.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00004303-10-7359540, whole genome shotgun sequence 738,351
JADJYJ010000004.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00006392-10-4110510, whole genome shotgun sequence 412,158
JADJYJ010000005.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00006474-10-678360, whole genome shotgun sequence 67,394
JADJYJ010000006.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00007061-10-3399290, whole genome shotgun sequence 337,034
JADJYJ010000007.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00007984-10-3163830, whole genome shotgun sequence 315,953
JADJYJ010000008.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00008134-10-3922990, whole genome shotgun sequence 392,271
JADJYJ010000009.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00009181-10-162150, whole genome shotgun sequence 16,122
JADJYJ010000010.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00009777-10-2732480, whole genome shotgun sequence 273,855
JADJYJ010000011.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00010316-10-1820800, whole genome shotgun sequence 182,514
JADJYJ010000012.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00010823-10-221770, whole genome shotgun sequence 22,278
JADJYJ010000013.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00011399-10-566480, whole genome shotgun sequence 56,754
JADJYJ010000014.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00011597-10-1516950, whole genome shotgun sequence 150,867
JADJYJ010000015.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00011657-10-2395460, whole genome shotgun sequence 240,712
JADJYJ010000016.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00012019-10-213390, whole genome shotgun sequence 20,856
JADJYJ010000017.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00012024-10-2493740, whole genome shotgun sequence 250,133
JADJYJ010000018.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00012099-10-1986290, whole genome shotgun sequence 199,461
JADJYJ010000019.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00015631-10-1061030, whole genome shotgun sequence 105,981
JADJYJ010000020.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00017256-10-1452310, whole genome shotgun sequence 145,981
JADJYJ010000021.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00023339-10-648330, whole genome shotgun sequence 65,438
JADJYJ010000022.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00024146-10-537390, whole genome shotgun sequence 53,935
JADJYJ010000023.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00025697-10-209320, whole genome shotgun sequence 21,000
JADJYJ010000024.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00030598-10-580360, whole genome shotgun sequence 58,214
JADJYJ010000025.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00043549-10-343380, whole genome shotgun sequence 34,503
JADJYJ010000026.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00064063-10-266600, whole genome shotgun sequence 26,880
JADJYJ010000027.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00070222-10-137430, whole genome shotgun sequence 13,552
JADJYJ010000028.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig00322340-10-1793390, whole genome shotgun sequence 179,569
JADJYJ010000029.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig01430449-10-1568470, whole genome shotgun sequence 156,841
JADJYJ010000030.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig01430517-10-3414250, whole genome shotgun sequence 343,090
JADJYJ010000031.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig01430549-10-3461340, whole genome shotgun sequence 346,629
JADJYJ010000032.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig01430591-10-1135440, whole genome shotgun sequence 113,765
JADJYJ010000033.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig01430592-10-243760, whole genome shotgun sequence 24,325
JADJYJ010000034.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig01430620-10-1684330, whole genome shotgun sequence 169,666
JADJYJ010000035.1 MAG: Candidatus Amarolinea dominans isolate Lyne_BATAC.272 tig01430665-10-2596340, whole genome shotgun sequence 260,856

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory