fast.genomicscompare 6,575 genera of bacteria & archaea

 

CAITIQ01 sp016719945 Lyne_18-Q3-R50-59_BAT3C.601

Genome identifier: GCA_016719945.1

NCBI assembly name: ASM1671994v1

GTDB taxonomy: Bacteria, Myxococcota, Polyangia, Polyangiales, Polyangiaceae, CAITIQ01, CAITIQ01 sp016719945

NCBI taxonomy: Bacteria, Myxococcota, Polyangiales, Polyangiaceae

Scaffolds: 45

Genes: 8,010 Protein-coding: 7,554 RNAs: 59 pseudogenes: 397

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADJYE010000001.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00002456-10-9959250, whole genome shotgun sequence 997,048
JADJYE010000002.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00002737-10-9003190, whole genome shotgun sequence 902,128
JADJYE010000003.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00003521-10-6629070, whole genome shotgun sequence 663,072
JADJYE010000004.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00004461-10-168280, whole genome shotgun sequence 16,671
JADJYE010000005.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00005121-10-2746820, whole genome shotgun sequence 274,381
JADJYE010000006.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00005179-10-5321780, whole genome shotgun sequence 532,878
JADJYE010000007.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00005836-10-3183910, whole genome shotgun sequence 318,382
JADJYE010000008.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00006518-10-5221030, whole genome shotgun sequence 522,899
JADJYE010000009.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00007675-10-557190, whole genome shotgun sequence 55,718
JADJYE010000010.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00009222-10-2373840, whole genome shotgun sequence 237,735
JADJYE010000011.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00009418-10-981500, whole genome shotgun sequence 99,667
JADJYE010000012.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00009501-10-2270630, whole genome shotgun sequence 227,559
JADJYE010000013.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00010931-10-1125400, whole genome shotgun sequence 112,129
JADJYE010000014.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00012264-10-2323620, whole genome shotgun sequence 232,489
JADJYE010000015.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00014043-10-1325490, whole genome shotgun sequence 132,002
JADJYE010000016.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00014442-10-757370, whole genome shotgun sequence 75,759
JADJYE010000017.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00015839-10-1624710, whole genome shotgun sequence 162,719
JADJYE010000018.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00016470-10-1183910, whole genome shotgun sequence 118,540
JADJYE010000019.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00019945-10-1075370, whole genome shotgun sequence 107,575
JADJYE010000020.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00027818-10-1095650, whole genome shotgun sequence 109,310
JADJYE010000021.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00028809-10-840570, whole genome shotgun sequence 84,169
JADJYE010000022.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00036041-10-329960, whole genome shotgun sequence 32,743
JADJYE010000023.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00088619-10-84300, whole genome shotgun sequence 8,463
JADJYE010000024.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00090059-10-89130, whole genome shotgun sequence 8,302
JADJYE010000025.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00102240-10-125260, whole genome shotgun sequence 10,585
JADJYE010000026.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00102284-10-145740, whole genome shotgun sequence 14,610
JADJYE010000027.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00111032-10-52840, whole genome shotgun sequence 5,315
JADJYE010000028.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00123417-10-55480, whole genome shotgun sequence 5,548
JADJYE010000029.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00276049-10-56650, whole genome shotgun sequence 5,681
JADJYE010000030.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00321090-10-5963080, whole genome shotgun sequence 596,690
JADJYE010000031.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00321091-10-3399040, whole genome shotgun sequence 340,685
JADJYE010000032.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00321227-10-3453030, whole genome shotgun sequence 345,063
JADJYE010000033.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00321229-10-3985930, whole genome shotgun sequence 398,742
JADJYE010000034.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00321583-10-1325300, whole genome shotgun sequence 132,743
JADJYE010000035.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00321584-10-2909990, whole genome shotgun sequence 291,521
JADJYE010000036.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00321614-10-1044600, whole genome shotgun sequence 104,590
JADJYE010000037.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00322418-10-911630, whole genome shotgun sequence 91,226
JADJYE010000038.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00322420-10-2364760, whole genome shotgun sequence 237,458
JADJYE010000039.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00322585-10-585060, whole genome shotgun sequence 58,533
JADJYE010000040.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig00322852-10-797170, whole genome shotgun sequence 79,619
JADJYE010000041.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig01430397-10-3592320, whole genome shotgun sequence 359,525
JADJYE010000042.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig01430690-10-761320, whole genome shotgun sequence 76,337
JADJYE010000043.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig01431908-10-539790, whole genome shotgun sequence 54,024
JADJYE010000044.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig01434111-10-138260, whole genome shotgun sequence 13,840
JADJYE010000045.1 MAG: Polyangiaceae bacterium isolate Lyne_18-Q3-R50-59_BAT3C.601 tig01437847-10-263600, whole genome shotgun sequence 26,172

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory