fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADKJW01 sp016720835 Vibo_18-Q3-R45-57_BATAC.435

Genome identifier: GCA_016720835.1

NCBI assembly name: ASM1672083v1

GTDB taxonomy: Bacteria, Bacteroidota, SZUA-365, SZUA-365, SZUA-365, JADKJW01, JADKJW01 sp016720835

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria

Scaffolds: 31

Genes: 4,011 Protein-coding: 3,846 RNAs: 48 pseudogenes: 117

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADKJW010000001.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00001494-10-6885030, whole genome shotgun sequence 685,003
JADKJW010000002.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00001844-10-6090990, whole genome shotgun sequence 611,205
JADKJW010000003.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00002518-10-4011560, whole genome shotgun sequence 402,649
JADKJW010000004.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00003018-10-3431620, whole genome shotgun sequence 346,310
JADKJW010000005.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00003830-10-2931370, whole genome shotgun sequence 294,495
JADKJW010000006.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00004063-10-2061310, whole genome shotgun sequence 207,328
JADKJW010000007.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00004363-10-2618080, whole genome shotgun sequence 262,424
JADKJW010000008.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00004460-10-866630, whole genome shotgun sequence 86,332
JADKJW010000009.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00005407-10-2226860, whole genome shotgun sequence 222,262
JADKJW010000010.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00005627-10-1780710, whole genome shotgun sequence 178,880
JADKJW010000011.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00005986-10-1409540, whole genome shotgun sequence 140,997
JADKJW010000012.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00007062-10-473360, whole genome shotgun sequence 47,315
JADKJW010000013.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00007548-10-1416380, whole genome shotgun sequence 141,973
JADKJW010000014.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00007609-10-1344390, whole genome shotgun sequence 134,525
JADKJW010000015.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00007650-10-1425040, whole genome shotgun sequence 143,180
JADKJW010000016.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00008934-10-1109510, whole genome shotgun sequence 111,135
JADKJW010000017.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00010801-10-767500, whole genome shotgun sequence 76,986
JADKJW010000018.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00010867-10-918850, whole genome shotgun sequence 91,803
JADKJW010000019.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00013067-10-293390, whole genome shotgun sequence 29,362
JADKJW010000020.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00014441-10-497800, whole genome shotgun sequence 49,831
JADKJW010000021.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00014904-10-392790, whole genome shotgun sequence 39,402
JADKJW010000022.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00015680-10-624540, whole genome shotgun sequence 62,484
JADKJW010000023.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00016832-10-466520, whole genome shotgun sequence 46,739
JADKJW010000024.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00017221-10-567370, whole genome shotgun sequence 56,896
JADKJW010000025.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00018704-10-381430, whole genome shotgun sequence 38,263
JADKJW010000026.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00021582-10-248680, whole genome shotgun sequence 25,042
JADKJW010000027.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00039150-10-335420, whole genome shotgun sequence 33,847
JADKJW010000028.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00055862-10-201070, whole genome shotgun sequence 20,019
JADKJW010000029.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00140000-10-129120, whole genome shotgun sequence 12,965
JADKJW010000030.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00724388-10-112690, whole genome shotgun sequence 11,288
JADKJW010000031.1 MAG: Ignavibacteria bacterium isolate Vibo_18-Q3-R45-57_BATAC.435 tig00724389-10-3799010, whole genome shotgun sequence 379,677

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory