fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADKIY01 sp016722575 Skiv_18-Q3-R9-52_MAXAC.212

Genome identifier: GCA_016722575.1

NCBI assembly name: ASM1672257v1

GTDB taxonomy: Bacteria, Elusimicrobiota, Elusimicrobia, FEN-1173, FEN-1173, JADKIY01, JADKIY01 sp016722575

NCBI taxonomy: Bacteria, Elusimicrobiota

Scaffolds: 9

Genes: 2,493 Protein-coding: 2,413 RNAs: 51 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADKIY010000001.1 MAG: Elusimicrobia bacterium isolate Skiv_18-Q3-R9-52_MAXAC.212 tig00000460-10-8469010, whole genome shotgun sequence 850,996
JADKIY010000002.1 MAG: Elusimicrobia bacterium isolate Skiv_18-Q3-R9-52_MAXAC.212 tig00001047-10-10990570, whole genome shotgun sequence 1,104,133
JADKIY010000003.1 MAG: Elusimicrobia bacterium isolate Skiv_18-Q3-R9-52_MAXAC.212 tig00001692-10-199820, whole genome shotgun sequence 20,125
JADKIY010000004.1 MAG: Elusimicrobia bacterium isolate Skiv_18-Q3-R9-52_MAXAC.212 tig00001823-10-168720, whole genome shotgun sequence 17,031
JADKIY010000005.1 MAG: Elusimicrobia bacterium isolate Skiv_18-Q3-R9-52_MAXAC.212 tig00003119-10-2235240, whole genome shotgun sequence 224,644
JADKIY010000006.1 MAG: Elusimicrobia bacterium isolate Skiv_18-Q3-R9-52_MAXAC.212 tig00003602-10-4518540, whole genome shotgun sequence 455,997
JADKIY010000007.1 MAG: Elusimicrobia bacterium isolate Skiv_18-Q3-R9-52_MAXAC.212 tig00020638-10-823630, whole genome shotgun sequence 82,502
JADKIY010000008.1 MAG: Elusimicrobia bacterium isolate Skiv_18-Q3-R9-52_MAXAC.212 tig00289432-10-174140, whole genome shotgun sequence 17,320
JADKIY010000009.1 MAG: Elusimicrobia bacterium isolate Skiv_18-Q3-R9-52_MAXAC.212 tig01148961-10-121720, whole genome shotgun sequence 12,229

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory