fast.genomicscompare 6,575 genera of bacteria & archaea

 

TMED25 sp016780665 BS307-5m-G8

Genome identifier: GCA_016778965.1

NCBI assembly name: ASM1677896v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, TMED25, TMED25, TMED25, TMED25 sp016780665

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales

Scaffolds: 50

Genes: 1,877 Protein-coding: 1,819 RNAs: 50 pseudogenes: 8

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADHON010000001.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C3, whole genome shotgun sequence 298,089
JADHON010000002.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C9, whole genome shotgun sequence 252,214
JADHON010000003.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C12, whole genome shotgun sequence 229,004
JADHON010000004.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C16, whole genome shotgun sequence 206,409
JADHON010000005.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C18, whole genome shotgun sequence 198,803
JADHON010000006.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C65, whole genome shotgun sequence 118,652
JADHON010000007.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C340, whole genome shotgun sequence 52,602
JADHON010000008.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C856, whole genome shotgun sequence 31,558
JADHON010000009.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C2462, whole genome shotgun sequence 16,781
JADHON010000010.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C2943, whole genome shotgun sequence 15,043
JADHON010000011.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C3222, whole genome shotgun sequence 14,203
JADHON010000012.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C3386, whole genome shotgun sequence 13,747
JADHON010000013.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C3892, whole genome shotgun sequence 12,478
JADHON010000014.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C4094, whole genome shotgun sequence 12,089
JADHON010000015.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C4214, whole genome shotgun sequence 11,911
JADHON010000016.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C4339, whole genome shotgun sequence 11,702
JADHON010000017.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C4453, whole genome shotgun sequence 11,492
JADHON010000018.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C4535, whole genome shotgun sequence 11,333
JADHON010000019.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C4751, whole genome shotgun sequence 10,962
JADHON010000020.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C5422, whole genome shotgun sequence 10,070
JADHON010000021.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C6965, whole genome shotgun sequence 8,586
JADHON010000022.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C7169, whole genome shotgun sequence 8,411
JADHON010000023.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C7610, whole genome shotgun sequence 8,062
JADHON010000024.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C7741, whole genome shotgun sequence 7,957
JADHON010000025.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C7897, whole genome shotgun sequence 7,845
JADHON010000026.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C8128, whole genome shotgun sequence 7,704
JADHON010000027.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C8153, whole genome shotgun sequence 7,691
JADHON010000028.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C8288, whole genome shotgun sequence 7,613
JADHON010000029.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C9259, whole genome shotgun sequence 7,050
JADHON010000030.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C9358, whole genome shotgun sequence 7,001
JADHON010000031.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C9566, whole genome shotgun sequence 6,905
JADHON010000032.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C9584, whole genome shotgun sequence 6,897
JADHON010000033.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C9599, whole genome shotgun sequence 6,890
JADHON010000034.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C9663, whole genome shotgun sequence 6,864
JADHON010000035.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C9839, whole genome shotgun sequence 6,784
JADHON010000036.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C10862, whole genome shotgun sequence 6,307
JADHON010000037.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C11684, whole genome shotgun sequence 5,984
JADHON010000038.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C11912, whole genome shotgun sequence 5,910
JADHON010000039.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C12830, whole genome shotgun sequence 5,616
JADHON010000040.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C12999, whole genome shotgun sequence 5,574
JADHON010000041.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C13051, whole genome shotgun sequence 5,557
JADHON010000042.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C13082, whole genome shotgun sequence 5,546
JADHON010000043.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C13166, whole genome shotgun sequence 5,517
JADHON010000044.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C13409, whole genome shotgun sequence 5,441
JADHON010000045.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C13491, whole genome shotgun sequence 5,420
JADHON010000046.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C13493, whole genome shotgun sequence 5,420
JADHON010000047.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C14109, whole genome shotgun sequence 5,254
JADHON010000048.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C14828, whole genome shotgun sequence 5,065
JADHON010000049.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C14927, whole genome shotgun sequence 5,042
JADHON010000050.1 MAG: Hyphomicrobiales bacterium isolate BS307-5m-G8 BS307-5m-C14957, whole genome shotgun sequence 5,036

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory