Genome identifier: GCA_016869675.1
NCBI assembly name: JGI 2017-08-21
GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, SP197, SP197, VGDP01, VGDP01 sp016869675
NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria
Scaffolds: 97
Genes: 3,601 Protein-coding: 3,365 RNAs: 53 pseudogenes: 183
GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)
| scaffoldId | description | length |
|---|---|---|
| VGDP01000001.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000027, whole genome shotgun sequence | 234,894 |
| VGDP01000002.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000066, whole genome shotgun sequence | 158,709 |
| VGDP01000003.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000073, whole genome shotgun sequence | 154,065 |
| VGDP01000004.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000103, whole genome shotgun sequence | 136,004 |
| VGDP01000005.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000149, whole genome shotgun sequence | 117,177 |
| VGDP01000006.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000155, whole genome shotgun sequence | 115,128 |
| VGDP01000007.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000159, whole genome shotgun sequence | 114,076 |
| VGDP01000008.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000181, whole genome shotgun sequence | 109,545 |
| VGDP01000009.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000237, whole genome shotgun sequence | 96,786 |
| VGDP01000010.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000341, whole genome shotgun sequence | 82,853 |
| VGDP01000011.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000348, whole genome shotgun sequence | 82,126 |
| VGDP01000012.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000360, whole genome shotgun sequence | 80,759 |
| VGDP01000013.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000443, whole genome shotgun sequence | 73,318 |
| VGDP01000014.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000496, whole genome shotgun sequence | 69,200 |
| VGDP01000015.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000538, whole genome shotgun sequence | 66,947 |
| VGDP01000016.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000546, whole genome shotgun sequence | 66,499 |
| VGDP01000017.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000605, whole genome shotgun sequence | 62,755 |
| VGDP01000018.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000675, whole genome shotgun sequence | 59,855 |
| VGDP01000019.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000688, whole genome shotgun sequence | 59,277 |
| VGDP01000020.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000736, whole genome shotgun sequence | 57,123 |
| VGDP01000021.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000764, whole genome shotgun sequence | 55,946 |
| VGDP01000022.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000789, whole genome shotgun sequence | 55,044 |
| VGDP01000023.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000951, whole genome shotgun sequence | 50,592 |
| VGDP01000024.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10000986, whole genome shotgun sequence | 49,671 |
| VGDP01000025.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10001205, whole genome shotgun sequence | 44,733 |
| VGDP01000026.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10001208, whole genome shotgun sequence | 44,697 |
| VGDP01000027.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10001292, whole genome shotgun sequence | 43,088 |
| VGDP01000028.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10001311, whole genome shotgun sequence | 42,790 |
| VGDP01000029.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10001616, whole genome shotgun sequence | 37,701 |
| VGDP01000030.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10001631, whole genome shotgun sequence | 37,518 |
| VGDP01000031.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10001674, whole genome shotgun sequence | 36,817 |
| VGDP01000032.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10001725, whole genome shotgun sequence | 36,198 |
| VGDP01000033.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10001973, whole genome shotgun sequence | 33,431 |
| VGDP01000034.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002148, whole genome shotgun sequence | 31,747 |
| VGDP01000035.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002161, whole genome shotgun sequence | 31,587 |
| VGDP01000036.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002269, whole genome shotgun sequence | 30,807 |
| VGDP01000037.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002299, whole genome shotgun sequence | 30,559 |
| VGDP01000038.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002384, whole genome shotgun sequence | 29,924 |
| VGDP01000039.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002407, whole genome shotgun sequence | 29,785 |
| VGDP01000040.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002536, whole genome shotgun sequence | 28,926 |
| VGDP01000041.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002711, whole genome shotgun sequence | 27,725 |
| VGDP01000042.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002736, whole genome shotgun sequence | 27,590 |
| VGDP01000043.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002813, whole genome shotgun sequence | 27,148 |
| VGDP01000044.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002914, whole genome shotgun sequence | 26,493 |
| VGDP01000045.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002923, whole genome shotgun sequence | 26,450 |
| VGDP01000046.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10002945, whole genome shotgun sequence | 26,356 |
| VGDP01000047.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10003005, whole genome shotgun sequence | 26,043 |
| VGDP01000048.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10003302, whole genome shotgun sequence | 24,660 |
| VGDP01000049.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10003525, whole genome shotgun sequence | 23,651 |
| VGDP01000050.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10003867, whole genome shotgun sequence | 22,259 |
| VGDP01000051.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10004057, whole genome shotgun sequence | 21,564 |
| VGDP01000052.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10004311, whole genome shotgun sequence | 20,717 |
| VGDP01000053.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10005093, whole genome shotgun sequence | 18,505 |
| VGDP01000054.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10005245, whole genome shotgun sequence | 18,105 |
| VGDP01000055.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10006147, whole genome shotgun sequence | 16,197 |
| VGDP01000056.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10006282, whole genome shotgun sequence | 15,965 |
| VGDP01000057.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10006418, whole genome shotgun sequence | 15,764 |
| VGDP01000058.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10006625, whole genome shotgun sequence | 15,453 |
| VGDP01000059.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10007103, whole genome shotgun sequence | 14,711 |
| VGDP01000060.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10007182, whole genome shotgun sequence | 14,594 |
| VGDP01000061.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10008813, whole genome shotgun sequence | 12,657 |
| VGDP01000062.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10008981, whole genome shotgun sequence | 12,496 |
| VGDP01000063.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10009455, whole genome shotgun sequence | 12,066 |
| VGDP01000064.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10009918, whole genome shotgun sequence | 11,697 |
| VGDP01000065.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10010304, whole genome shotgun sequence | 11,367 |
| VGDP01000066.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10010477, whole genome shotgun sequence | 11,248 |
| VGDP01000067.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10011388, whole genome shotgun sequence | 10,599 |
| VGDP01000068.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10011604, whole genome shotgun sequence | 10,441 |
| VGDP01000069.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10011648, whole genome shotgun sequence | 10,416 |
| VGDP01000070.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10012193, whole genome shotgun sequence | 10,071 |
| VGDP01000071.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10012259, whole genome shotgun sequence | 10,029 |
| VGDP01000072.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10012451, whole genome shotgun sequence | 9,915 |
| VGDP01000073.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10012721, whole genome shotgun sequence | 9,761 |
| VGDP01000074.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10013397, whole genome shotgun sequence | 9,406 |
| VGDP01000075.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10014269, whole genome shotgun sequence | 8,972 |
| VGDP01000076.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10015067, whole genome shotgun sequence | 8,609 |
| VGDP01000077.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10016427, whole genome shotgun sequence | 8,051 |
| VGDP01000078.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10016553, whole genome shotgun sequence | 8,006 |
| VGDP01000079.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10016713, whole genome shotgun sequence | 7,950 |
| VGDP01000080.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10016719, whole genome shotgun sequence | 7,947 |
| VGDP01000081.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10019387, whole genome shotgun sequence | 7,106 |
| VGDP01000082.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10020190, whole genome shotgun sequence | 6,885 |
| VGDP01000083.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10021518, whole genome shotgun sequence | 6,552 |
| VGDP01000084.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10023290, whole genome shotgun sequence | 6,161 |
| VGDP01000085.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10025697, whole genome shotgun sequence | 5,711 |
| VGDP01000086.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10026141, whole genome shotgun sequence | 5,631 |
| VGDP01000087.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10028853, whole genome shotgun sequence | 5,191 |
| VGDP01000088.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10031385, whole genome shotgun sequence | 4,864 |
| VGDP01000089.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10031496, whole genome shotgun sequence | 4,849 |
| VGDP01000090.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10036092, whole genome shotgun sequence | 4,345 |
| VGDP01000091.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10043980, whole genome shotgun sequence | 3,687 |
| VGDP01000092.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10055919, whole genome shotgun sequence | 3,018 |
| VGDP01000093.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10059148, whole genome shotgun sequence | 2,884 |
| VGDP01000094.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10061006, whole genome shotgun sequence | 2,810 |
| VGDP01000095.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10075801, whole genome shotgun sequence | 2,346 |
| VGDP01000096.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10093669, whole genome shotgun sequence | 1,968 |
| VGDP01000097.1 | MAG: Alphaproteobacteria bacterium isolate M_DeepCast_50m_m2_221 M_DeepCast_50m_m2_221_Ga0194121_10108775, whole genome shotgun sequence | 1,743 |