fast.genomicscompare 6,575 genera of bacteria & archaea

 

GCA-2402195 sp017302595 UWPOB_RICK2

Genome identifier: GCA_017302595.1

NCBI assembly name: ASM1730259v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales, Rickettsiaceae, GCA-2402195, GCA-2402195 sp017302595

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales

Scaffolds: 3

Genes: 1,262 Protein-coding: 1,217 RNAs: 40 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAFLDA010000001.1 MAG: Rickettsiales bacterium isolate UWPOB_RICK2 gnl_X_FCFMKKHF_1, whole genome shotgun sequence 1,057,085
JAFLDA010000002.1 MAG: Rickettsiales bacterium isolate UWPOB_RICK2 gnl_X_FCFMKKHF_2, whole genome shotgun sequence 234,813
JAFLDA010000003.1 MAG: Rickettsiales bacterium isolate UWPOB_RICK2 gnl_X_FCFMKKHF_3, whole genome shotgun sequence 33,268

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory