fast.genomicscompare 6,575 genera of bacteria & archaea

 

UTCHB3 sp017302895 UWPOB_IGNAVI1

Genome identifier: GCA_017302895.1

NCBI assembly name: ASM1730289v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, Ignavibacteriales, Ignavibacteriaceae, UTCHB3, UTCHB3 sp017302895

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria

Scaffolds: 6

Genes: 3,239 Protein-coding: 3,185 RNAs: 50 pseudogenes: 4

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAFLBV010000001.1 MAG: Ignavibacteria bacterium isolate UWPOB_IGNAVI1 gnl_X_FGKGEEDA_1, whole genome shotgun sequence 1,895,574
JAFLBV010000002.1 MAG: Ignavibacteria bacterium isolate UWPOB_IGNAVI1 gnl_X_FGKGEEDA_2, whole genome shotgun sequence 1,122,606
JAFLBV010000003.1 MAG: Ignavibacteria bacterium isolate UWPOB_IGNAVI1 gnl_X_FGKGEEDA_3, whole genome shotgun sequence 508,499
JAFLBV010000004.1 MAG: Ignavibacteria bacterium isolate UWPOB_IGNAVI1 gnl_X_FGKGEEDA_4, whole genome shotgun sequence 326,902
JAFLBV010000005.1 MAG: Ignavibacteria bacterium isolate UWPOB_IGNAVI1 gnl_X_FGKGEEDA_5, whole genome shotgun sequence 68,616
JAFLBV010000006.1 MAG: Ignavibacteria bacterium isolate UWPOB_IGNAVI1 gnl_X_FGKGEEDA_6, whole genome shotgun sequence 61,220

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory