fast.genomicscompare 6,575 genera of bacteria & archaea

 

JABDJZ01 sp017643395 HXMU1420-14

Genome identifier: GCA_017643395.1

NCBI assembly name: ASM1764339v1

GTDB taxonomy: Bacteria, Bacteroidota, Rhodothermia, Rhodothermales, UBA10348, JABDJZ01, JABDJZ01 sp017643395

NCBI taxonomy: Bacteria, Rhodothermota, Rhodothermia, Rhodothermales

Scaffolds: 21

Genes: 3,718 Protein-coding: 3,651 RNAs: 65 pseudogenes: 2

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAEPNP010000001.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_1_length_2092188_cov_46.734051, whole genome shotgun sequence 2,092,188
JAEPNP010000002.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_2_length_544578_cov_44.835198, whole genome shotgun sequence 544,578
JAEPNP010000003.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_3_length_492898_cov_44.897880, whole genome shotgun sequence 492,898
JAEPNP010000004.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_4_length_432479_cov_45.361303, whole genome shotgun sequence 432,479
JAEPNP010000005.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_5_length_421678_cov_45.153733, whole genome shotgun sequence 421,678
JAEPNP010000006.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_6_length_245397_cov_44.102800, whole genome shotgun sequence 245,397
JAEPNP010000007.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_7_length_149029_cov_43.795310, whole genome shotgun sequence 149,029
JAEPNP010000008.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_8_length_115236_cov_43.854914, whole genome shotgun sequence 115,236
JAEPNP010000009.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_9_length_1511_cov_37.935844, whole genome shotgun sequence 1,511
JAEPNP010000010.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_10_length_1423_cov_65.482169, whole genome shotgun sequence 1,423
JAEPNP010000011.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_11_length_1324_cov_13.559295, whole genome shotgun sequence 1,324
JAEPNP010000012.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_12_length_1279_cov_3.356905, whole genome shotgun sequence 1,279
JAEPNP010000013.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_13_length_1220_cov_9.953631, whole genome shotgun sequence 1,220
JAEPNP010000014.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_14_length_1169_cov_11.969780, whole genome shotgun sequence 1,169
JAEPNP010000015.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_15_length_933_cov_7.403037, whole genome shotgun sequence 933
JAEPNP010000016.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_16_length_856_cov_6.094994, whole genome shotgun sequence 856
JAEPNP010000017.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_17_length_852_cov_6.010323, whole genome shotgun sequence 852
JAEPNP010000018.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_18_length_701_cov_3.439103, whole genome shotgun sequence 701
JAEPNP010000019.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_19_length_553_cov_2.331933, whole genome shotgun sequence 553
JAEPNP010000020.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_20_length_527_cov_1.935556, whole genome shotgun sequence 527
JAEPNP010000021.1 MAG: Rhodothermales bacterium isolate HXMU1420-14 NODE_21_length_506_cov_1.724942, whole genome shotgun sequence 506

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory