fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA1660 sp017644045 HCUG1432-5

Genome identifier: GCA_017644045.1

NCBI assembly name: ASM1764404v1

GTDB taxonomy: Bacteria, Myxococcota, Polyangia, Polyangiales, SG8-38, UBA1660, UBA1660 sp017644045

NCBI taxonomy: Bacteria, Deltaproteobacteria

Scaffolds: 39

Genes: 7,862 Protein-coding: 7,762 RNAs: 74 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAEPMI010000001.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_1_length_916126_cov_31.308311, whole genome shotgun sequence 916,126
JAEPMI010000002.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_2_length_795784_cov_32.147220, whole genome shotgun sequence 795,784
JAEPMI010000003.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_3_length_784232_cov_32.432337, whole genome shotgun sequence 784,232
JAEPMI010000004.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_4_length_723306_cov_31.493169, whole genome shotgun sequence 723,306
JAEPMI010000005.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_5_length_667926_cov_31.915273, whole genome shotgun sequence 667,926
JAEPMI010000006.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_6_length_661308_cov_30.856454, whole genome shotgun sequence 661,308
JAEPMI010000007.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_7_length_629868_cov_30.035399, whole genome shotgun sequence 629,868
JAEPMI010000008.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_8_length_596612_cov_30.094274, whole genome shotgun sequence 596,612
JAEPMI010000009.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_9_length_540429_cov_32.644339, whole genome shotgun sequence 540,429
JAEPMI010000010.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_10_length_462250_cov_30.030424, whole genome shotgun sequence 462,250
JAEPMI010000011.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_11_length_448680_cov_30.928944, whole genome shotgun sequence 448,680
JAEPMI010000012.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_12_length_448040_cov_30.271150, whole genome shotgun sequence 448,040
JAEPMI010000013.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_13_length_394068_cov_33.120262, whole genome shotgun sequence 394,068
JAEPMI010000014.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_14_length_385616_cov_32.829179, whole genome shotgun sequence 385,616
JAEPMI010000015.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_15_length_348503_cov_30.258993, whole genome shotgun sequence 348,503
JAEPMI010000016.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_16_length_172263_cov_30.565720, whole genome shotgun sequence 172,263
JAEPMI010000017.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_17_length_149305_cov_29.699024, whole genome shotgun sequence 149,305
JAEPMI010000018.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_18_length_102507_cov_32.727287, whole genome shotgun sequence 102,507
JAEPMI010000019.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_19_length_14279_cov_34.198071, whole genome shotgun sequence 14,279
JAEPMI010000020.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_20_length_5511_cov_32.906331, whole genome shotgun sequence 5,511
JAEPMI010000021.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_21_length_1760_cov_40.956625, whole genome shotgun sequence 1,760
JAEPMI010000022.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_22_length_1568_cov_46.630449, whole genome shotgun sequence 1,568
JAEPMI010000023.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_23_length_1470_cov_10.777459, whole genome shotgun sequence 1,470
JAEPMI010000024.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_24_length_1213_cov_10.547535, whole genome shotgun sequence 1,213
JAEPMI010000025.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_25_length_1145_cov_18.616105, whole genome shotgun sequence 1,145
JAEPMI010000026.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_26_length_1110_cov_10.715392, whole genome shotgun sequence 1,110
JAEPMI010000027.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_27_length_996_cov_4.570185, whole genome shotgun sequence 996
JAEPMI010000028.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_28_length_843_cov_2.809399, whole genome shotgun sequence 843
JAEPMI010000029.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_29_length_835_cov_35.718997, whole genome shotgun sequence 835
JAEPMI010000030.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_30_length_729_cov_6.128834, whole genome shotgun sequence 729
JAEPMI010000031.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_31_length_717_cov_11.762500, whole genome shotgun sequence 717
JAEPMI010000032.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_32_length_614_cov_11.437616, whole genome shotgun sequence 614
JAEPMI010000033.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_33_length_592_cov_1.149515, whole genome shotgun sequence 592
JAEPMI010000034.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_34_length_590_cov_18.808967, whole genome shotgun sequence 590
JAEPMI010000035.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_35_length_549_cov_2.194915, whole genome shotgun sequence 549
JAEPMI010000036.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_36_length_540_cov_2.634989, whole genome shotgun sequence 540
JAEPMI010000037.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_37_length_521_cov_1.000000, whole genome shotgun sequence 521
JAEPMI010000038.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_38_length_515_cov_1.351598, whole genome shotgun sequence 515
JAEPMI010000039.1 MAG: Deltaproteobacteria bacterium isolate HCUG1432-5 NODE_39_length_503_cov_1.779343, whole genome shotgun sequence 503

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory