fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAGNLA01 sp017999835 Go_SlDig_bin_19

Genome identifier: GCA_017999835.1

NCBI assembly name: ASM1799983v1

GTDB taxonomy: Bacteria, Caldisericota, Caldisericia, JAAYUI01, JAAYUI01, JAGNLA01, JAGNLA01 sp017999835

NCBI taxonomy: Bacteria, Caldisericota, Caldisericia

Scaffolds: 28

Genes: 1,686 Protein-coding: 1,625 RNAs: 50 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAGNLA010000001.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_33_length_289226_cov_11.433592, whole genome shotgun sequence 289,226
JAGNLA010000002.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_88_length_208663_cov_12.243804, whole genome shotgun sequence 208,663
JAGNLA010000003.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_153_length_160490_cov_11.850003, whole genome shotgun sequence 160,490
JAGNLA010000004.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_210_length_139922_cov_12.026911, whole genome shotgun sequence 139,922
JAGNLA010000005.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_240_length_131470_cov_11.943697, whole genome shotgun sequence 131,470
JAGNLA010000006.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_254_length_128516_cov_12.057926, whole genome shotgun sequence 128,516
JAGNLA010000007.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_345_length_110581_cov_11.990168, whole genome shotgun sequence 110,581
JAGNLA010000008.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_743_length_76641_cov_11.329887, whole genome shotgun sequence 76,641
JAGNLA010000009.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_896_length_70645_cov_11.822953, whole genome shotgun sequence 70,645
JAGNLA010000010.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_1191_length_61109_cov_11.097750, whole genome shotgun sequence 61,109
JAGNLA010000011.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_1494_length_54015_cov_11.661093, whole genome shotgun sequence 54,015
JAGNLA010000012.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_1524_length_53305_cov_12.194629, whole genome shotgun sequence 53,305
JAGNLA010000013.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_2094_length_45652_cov_11.667743, whole genome shotgun sequence 45,652
JAGNLA010000014.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_2297_length_43230_cov_11.524697, whole genome shotgun sequence 43,230
JAGNLA010000015.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_3250_length_34751_cov_11.667803, whole genome shotgun sequence 34,751
JAGNLA010000016.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_3416_length_33722_cov_11.388689, whole genome shotgun sequence 33,722
JAGNLA010000017.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_3420_length_33676_cov_11.789293, whole genome shotgun sequence 33,676
JAGNLA010000018.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_4698_length_27588_cov_11.703871, whole genome shotgun sequence 27,588
JAGNLA010000019.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_4718_length_27492_cov_12.500530, whole genome shotgun sequence 27,492
JAGNLA010000020.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_5033_length_26460_cov_12.298219, whole genome shotgun sequence 26,460
JAGNLA010000021.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_5181_length_25951_cov_11.441024, whole genome shotgun sequence 25,951
JAGNLA010000022.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_5763_length_24283_cov_10.762833, whole genome shotgun sequence 24,283
JAGNLA010000023.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_8514_length_18544_cov_12.893848, whole genome shotgun sequence 18,544
JAGNLA010000024.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_8645_length_18348_cov_10.741781, whole genome shotgun sequence 18,348
JAGNLA010000025.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_9203_length_17605_cov_10.137087, whole genome shotgun sequence 17,605
JAGNLA010000026.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_11706_length_14891_cov_11.436196, whole genome shotgun sequence 14,891
JAGNLA010000027.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_28237_length_8058_cov_11.364267, whole genome shotgun sequence 8,058
JAGNLA010000028.1 MAG: Caldisericia bacterium isolate Go_SlDig_bin_19 Go_SlDig_142387_length_2841_cov_13.186072, whole genome shotgun sequence 2,841

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory