fast.genomicscompare 6,575 genera of bacteria & archaea

 

RZYY01 sp012516825 Go_Prim_bin_120

Genome identifier: GCA_018001385.1

NCBI assembly name: ASM1800138v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, 4484-276, RZYY01, RZYY01 sp012516825

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales

Scaffolds: 89

Genes: 2,225 Protein-coding: 2,169 RNAs: 51 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAGNIB010000001.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_14_length_153116_cov_10.068789, whole genome shotgun sequence 153,116
JAGNIB010000002.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_15_length_149614_cov_8.728498, whole genome shotgun sequence 149,614
JAGNIB010000003.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_21_length_129698_cov_10.012711, whole genome shotgun sequence 129,698
JAGNIB010000004.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_30_length_115019_cov_9.610556, whole genome shotgun sequence 115,019
JAGNIB010000005.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_45_length_94423_cov_9.855370, whole genome shotgun sequence 94,423
JAGNIB010000006.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_49_length_91493_cov_9.603364, whole genome shotgun sequence 91,493
JAGNIB010000007.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_52_length_89608_cov_9.437199, whole genome shotgun sequence 89,608
JAGNIB010000008.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_62_length_84100_cov_9.349827, whole genome shotgun sequence 84,100
JAGNIB010000009.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_73_length_77167_cov_9.095807, whole genome shotgun sequence 77,167
JAGNIB010000010.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_75_length_76744_cov_10.262435, whole genome shotgun sequence 76,744
JAGNIB010000011.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_80_length_74937_cov_9.466007, whole genome shotgun sequence 74,937
JAGNIB010000012.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_81_length_74702_cov_9.885216, whole genome shotgun sequence 74,702
JAGNIB010000013.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_82_length_74373_cov_9.520580, whole genome shotgun sequence 74,373
JAGNIB010000014.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_86_length_73614_cov_9.144325, whole genome shotgun sequence 73,614
JAGNIB010000015.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_95_length_70019_cov_8.746495, whole genome shotgun sequence 70,019
JAGNIB010000016.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_105_length_67062_cov_8.776769, whole genome shotgun sequence 67,062
JAGNIB010000017.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_135_length_60282_cov_9.118328, whole genome shotgun sequence 60,282
JAGNIB010000018.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_166_length_54603_cov_10.083284, whole genome shotgun sequence 54,603
JAGNIB010000019.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_177_length_52164_cov_10.644272, whole genome shotgun sequence 52,164
JAGNIB010000020.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_193_length_50398_cov_9.841340, whole genome shotgun sequence 50,398
JAGNIB010000021.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_204_length_49413_cov_9.006858, whole genome shotgun sequence 49,413
JAGNIB010000022.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_207_length_48771_cov_10.362511, whole genome shotgun sequence 48,771
JAGNIB010000023.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_248_length_44480_cov_8.980655, whole genome shotgun sequence 44,480
JAGNIB010000024.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_264_length_43229_cov_9.085100, whole genome shotgun sequence 43,229
JAGNIB010000025.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_268_length_42914_cov_9.192068, whole genome shotgun sequence 42,914
JAGNIB010000026.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_333_length_38920_cov_9.670894, whole genome shotgun sequence 38,920
JAGNIB010000027.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_377_length_37016_cov_10.249858, whole genome shotgun sequence 37,016
JAGNIB010000028.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_416_length_35737_cov_9.760769, whole genome shotgun sequence 35,737
JAGNIB010000029.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_483_length_33104_cov_9.912848, whole genome shotgun sequence 33,104
JAGNIB010000030.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_512_length_32202_cov_9.492533, whole genome shotgun sequence 32,202
JAGNIB010000031.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_518_length_32113_cov_10.356781, whole genome shotgun sequence 32,113
JAGNIB010000032.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_578_length_30571_cov_10.226613, whole genome shotgun sequence 30,571
JAGNIB010000033.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_615_length_29882_cov_9.314670, whole genome shotgun sequence 29,882
JAGNIB010000034.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_690_length_28134_cov_9.099975, whole genome shotgun sequence 28,134
JAGNIB010000035.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_741_length_27416_cov_10.108249, whole genome shotgun sequence 27,416
JAGNIB010000036.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_778_length_26869_cov_8.752524, whole genome shotgun sequence 26,869
JAGNIB010000037.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_785_length_26751_cov_9.006273, whole genome shotgun sequence 26,751
JAGNIB010000038.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_813_length_26374_cov_10.620071, whole genome shotgun sequence 26,374
JAGNIB010000039.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_845_length_25956_cov_9.860041, whole genome shotgun sequence 25,956
JAGNIB010000040.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_912_length_24987_cov_10.043926, whole genome shotgun sequence 24,987
JAGNIB010000041.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_950_length_24539_cov_10.118016, whole genome shotgun sequence 24,539
JAGNIB010000042.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_1044_length_23433_cov_10.292886, whole genome shotgun sequence 23,433
JAGNIB010000043.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_1088_length_22857_cov_9.091905, whole genome shotgun sequence 22,857
JAGNIB010000044.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_1403_length_20462_cov_9.938431, whole genome shotgun sequence 20,462
JAGNIB010000045.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_2031_length_17200_cov_7.976395, whole genome shotgun sequence 17,200
JAGNIB010000046.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_2493_length_15640_cov_8.254754, whole genome shotgun sequence 15,640
JAGNIB010000047.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_2550_length_15465_cov_9.021646, whole genome shotgun sequence 15,465
JAGNIB010000048.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_2651_length_15209_cov_8.686646, whole genome shotgun sequence 15,209
JAGNIB010000049.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_3683_length_13139_cov_8.904626, whole genome shotgun sequence 13,139
JAGNIB010000050.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_3799_length_12962_cov_9.383950, whole genome shotgun sequence 12,962
JAGNIB010000051.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_7612_length_9368_cov_9.358727, whole genome shotgun sequence 9,368
JAGNIB010000052.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_8342_length_8963_cov_9.348461, whole genome shotgun sequence 8,963
JAGNIB010000053.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_8838_length_8696_cov_9.217762, whole genome shotgun sequence 8,696
JAGNIB010000054.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_10363_length_8032_cov_10.926755, whole genome shotgun sequence 8,032
JAGNIB010000055.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_11629_length_7605_cov_10.047473, whole genome shotgun sequence 7,605
JAGNIB010000056.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_12787_length_7265_cov_10.104791, whole genome shotgun sequence 7,265
JAGNIB010000057.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_15859_length_6571_cov_7.940565, whole genome shotgun sequence 6,571
JAGNIB010000058.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_15956_length_6550_cov_13.172972, whole genome shotgun sequence 6,550
JAGNIB010000059.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_16662_length_6415_cov_7.830471, whole genome shotgun sequence 6,415
JAGNIB010000060.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_19042_length_6015_cov_9.687160, whole genome shotgun sequence 6,015
JAGNIB010000061.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_19983_length_5872_cov_9.802785, whole genome shotgun sequence 5,872
JAGNIB010000062.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_22416_length_5552_cov_5.062488, whole genome shotgun sequence 5,552
JAGNIB010000063.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_23389_length_5438_cov_8.315195, whole genome shotgun sequence 5,438
JAGNIB010000064.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_25380_length_5226_cov_9.397921, whole genome shotgun sequence 5,226
JAGNIB010000065.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_28871_length_4905_cov_10.376308, whole genome shotgun sequence 4,905
JAGNIB010000066.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_31242_length_4717_cov_9.560131, whole genome shotgun sequence 4,717
JAGNIB010000067.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_33908_length_4532_cov_9.923042, whole genome shotgun sequence 4,532
JAGNIB010000068.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_36983_length_4345_cov_11.068516, whole genome shotgun sequence 4,345
JAGNIB010000069.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_39523_length_4202_cov_8.305767, whole genome shotgun sequence 4,202
JAGNIB010000070.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_39683_length_4194_cov_10.281780, whole genome shotgun sequence 4,194
JAGNIB010000071.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_40100_length_4173_cov_10.840089, whole genome shotgun sequence 4,173
JAGNIB010000072.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_41451_length_4105_cov_8.970085, whole genome shotgun sequence 4,105
JAGNIB010000073.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_42705_length_4044_cov_7.875160, whole genome shotgun sequence 4,044
JAGNIB010000074.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_44224_length_3977_cov_10.550390, whole genome shotgun sequence 3,977
JAGNIB010000075.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_45878_length_3904_cov_9.653693, whole genome shotgun sequence 3,904
JAGNIB010000076.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_46328_length_3885_cov_10.012773, whole genome shotgun sequence 3,885
JAGNIB010000077.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_50317_length_3729_cov_7.229595, whole genome shotgun sequence 3,729
JAGNIB010000078.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_51923_length_3672_cov_8.728914, whole genome shotgun sequence 3,672
JAGNIB010000079.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_53517_length_3616_cov_9.834336, whole genome shotgun sequence 3,616
JAGNIB010000080.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_54278_length_3590_cov_14.834537, whole genome shotgun sequence 3,590
JAGNIB010000081.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_54677_length_3578_cov_7.996233, whole genome shotgun sequence 3,578
JAGNIB010000082.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_74560_length_3065_cov_10.635807, whole genome shotgun sequence 3,065
JAGNIB010000083.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_79671_length_2965_cov_17.165962, whole genome shotgun sequence 2,965
JAGNIB010000084.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_82472_length_2914_cov_10.455328, whole genome shotgun sequence 2,914
JAGNIB010000085.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_85977_length_2852_cov_10.852844, whole genome shotgun sequence 2,852
JAGNIB010000086.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_92211_length_2755_cov_9.033866, whole genome shotgun sequence 2,755
JAGNIB010000087.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_94231_length_2726_cov_7.979608, whole genome shotgun sequence 2,726
JAGNIB010000088.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_95026_length_2715_cov_11.926971, whole genome shotgun sequence 2,715
JAGNIB010000089.1 MAG: Bacteroidales bacterium isolate Go_Prim_bin_120 Go_Prim_96267_length_2698_cov_7.364839, whole genome shotgun sequence 2,698

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory