fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAGNHB01 sp018001935 Go_SlDig_bin_149

Genome identifier: GCA_018001935.1

NCBI assembly name: ASM1800193v1

GTDB taxonomy: Bacteria, Acidobacteriota, JAAYUB01, JAAYUB01, JAAYUB01, JAGNHB01, JAGNHB01 sp018001935

NCBI taxonomy: Bacteria, Acidobacteriota

Scaffolds: 110

Genes: 4,212 Protein-coding: 4,126 RNAs: 53 pseudogenes: 33

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAGNHB010000001.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_44_length_259249_cov_23.557930, whole genome shotgun sequence 259,249
JAGNHB010000002.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_50_length_251623_cov_25.694170, whole genome shotgun sequence 251,623
JAGNHB010000003.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_115_length_186187_cov_27.332581, whole genome shotgun sequence 186,187
JAGNHB010000004.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_169_length_153067_cov_25.910403, whole genome shotgun sequence 153,067
JAGNHB010000005.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_178_length_151312_cov_24.589390, whole genome shotgun sequence 151,312
JAGNHB010000006.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_190_length_147265_cov_22.728112, whole genome shotgun sequence 147,265
JAGNHB010000007.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_203_length_142093_cov_23.080315, whole genome shotgun sequence 142,093
JAGNHB010000008.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_208_length_140001_cov_27.029534, whole genome shotgun sequence 140,001
JAGNHB010000009.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_216_length_136542_cov_27.326665, whole genome shotgun sequence 136,542
JAGNHB010000010.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_280_length_122368_cov_23.394148, whole genome shotgun sequence 122,368
JAGNHB010000011.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_361_length_108587_cov_23.151844, whole genome shotgun sequence 108,587
JAGNHB010000012.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_377_length_105283_cov_25.581565, whole genome shotgun sequence 105,283
JAGNHB010000013.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_385_length_104665_cov_23.564503, whole genome shotgun sequence 104,665
JAGNHB010000014.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_426_length_99250_cov_23.118519, whole genome shotgun sequence 99,250
JAGNHB010000015.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_442_length_97428_cov_24.626160, whole genome shotgun sequence 97,428
JAGNHB010000016.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_446_length_96993_cov_23.510313, whole genome shotgun sequence 96,993
JAGNHB010000017.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_584_length_84831_cov_25.299337, whole genome shotgun sequence 84,831
JAGNHB010000018.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_586_length_84786_cov_22.739012, whole genome shotgun sequence 84,786
JAGNHB010000019.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_611_length_83415_cov_23.629430, whole genome shotgun sequence 83,415
JAGNHB010000020.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_674_length_80347_cov_22.510883, whole genome shotgun sequence 80,347
JAGNHB010000021.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_675_length_80340_cov_25.471171, whole genome shotgun sequence 80,340
JAGNHB010000022.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_700_length_78745_cov_24.524549, whole genome shotgun sequence 78,745
JAGNHB010000023.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_752_length_76072_cov_26.590638, whole genome shotgun sequence 76,072
JAGNHB010000024.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_827_length_72999_cov_25.621405, whole genome shotgun sequence 72,999
JAGNHB010000025.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_914_length_70101_cov_23.071041, whole genome shotgun sequence 70,101
JAGNHB010000026.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1015_length_66292_cov_25.032479, whole genome shotgun sequence 66,292
JAGNHB010000027.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1064_length_64801_cov_25.893976, whole genome shotgun sequence 64,801
JAGNHB010000028.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1078_length_64442_cov_24.077509, whole genome shotgun sequence 64,442
JAGNHB010000029.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1085_length_64304_cov_22.367873, whole genome shotgun sequence 64,304
JAGNHB010000030.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1176_length_61669_cov_22.493712, whole genome shotgun sequence 61,669
JAGNHB010000031.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1185_length_61288_cov_26.678226, whole genome shotgun sequence 61,288
JAGNHB010000032.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1195_length_60965_cov_24.103192, whole genome shotgun sequence 60,965
JAGNHB010000033.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1199_length_60915_cov_26.306623, whole genome shotgun sequence 60,915
JAGNHB010000034.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1216_length_60554_cov_23.803085, whole genome shotgun sequence 60,554
JAGNHB010000035.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1225_length_60429_cov_26.099151, whole genome shotgun sequence 60,429
JAGNHB010000036.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1361_length_56876_cov_22.363795, whole genome shotgun sequence 56,876
JAGNHB010000037.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1374_length_56602_cov_22.848057, whole genome shotgun sequence 56,602
JAGNHB010000038.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1452_length_54779_cov_27.312889, whole genome shotgun sequence 54,779
JAGNHB010000039.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1472_length_54420_cov_24.679001, whole genome shotgun sequence 54,420
JAGNHB010000040.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1584_length_52502_cov_26.613556, whole genome shotgun sequence 52,502
JAGNHB010000041.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1649_length_51770_cov_25.379916, whole genome shotgun sequence 51,770
JAGNHB010000042.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1713_length_50846_cov_23.398036, whole genome shotgun sequence 50,846
JAGNHB010000043.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1826_length_49162_cov_22.506740, whole genome shotgun sequence 49,162
JAGNHB010000044.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1879_length_48341_cov_23.400983, whole genome shotgun sequence 48,341
JAGNHB010000045.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_1946_length_47362_cov_24.250852, whole genome shotgun sequence 47,362
JAGNHB010000046.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2008_length_46668_cov_27.572390, whole genome shotgun sequence 46,668
JAGNHB010000047.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2109_length_45383_cov_23.170585, whole genome shotgun sequence 45,383
JAGNHB010000048.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2154_length_44916_cov_23.506240, whole genome shotgun sequence 44,916
JAGNHB010000049.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2157_length_44889_cov_27.387516, whole genome shotgun sequence 44,889
JAGNHB010000050.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2231_length_43913_cov_24.694309, whole genome shotgun sequence 43,913
JAGNHB010000051.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2235_length_43894_cov_24.653643, whole genome shotgun sequence 43,894
JAGNHB010000052.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2346_length_42662_cov_24.120489, whole genome shotgun sequence 42,662
JAGNHB010000053.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2430_length_41783_cov_25.657144, whole genome shotgun sequence 41,783
JAGNHB010000054.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2835_length_38011_cov_22.581512, whole genome shotgun sequence 38,011
JAGNHB010000055.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2850_length_37828_cov_24.435665, whole genome shotgun sequence 37,828
JAGNHB010000056.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2973_length_36808_cov_23.146861, whole genome shotgun sequence 36,808
JAGNHB010000057.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_2989_length_36711_cov_25.054423, whole genome shotgun sequence 36,711
JAGNHB010000058.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_3019_length_36430_cov_26.711319, whole genome shotgun sequence 36,430
JAGNHB010000059.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_3026_length_36344_cov_21.328713, whole genome shotgun sequence 36,344
JAGNHB010000060.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_3060_length_36061_cov_23.366644, whole genome shotgun sequence 36,061
JAGNHB010000061.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_3348_length_34182_cov_23.122155, whole genome shotgun sequence 34,182
JAGNHB010000062.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_3404_length_33797_cov_23.829997, whole genome shotgun sequence 33,797
JAGNHB010000063.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_3596_length_32806_cov_25.814774, whole genome shotgun sequence 32,806
JAGNHB010000064.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_3876_length_31292_cov_22.487213, whole genome shotgun sequence 31,292
JAGNHB010000065.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_3904_length_31148_cov_24.246865, whole genome shotgun sequence 31,148
JAGNHB010000066.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_4106_length_30180_cov_31.546468, whole genome shotgun sequence 30,180
JAGNHB010000067.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_4271_length_29462_cov_24.596523, whole genome shotgun sequence 29,462
JAGNHB010000068.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_4438_length_28722_cov_23.147019, whole genome shotgun sequence 28,722
JAGNHB010000069.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_4470_length_28551_cov_24.563643, whole genome shotgun sequence 28,551
JAGNHB010000070.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_4748_length_27394_cov_23.528734, whole genome shotgun sequence 27,394
JAGNHB010000071.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_4955_length_26702_cov_23.600602, whole genome shotgun sequence 26,702
JAGNHB010000072.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_4987_length_26604_cov_23.417532, whole genome shotgun sequence 26,604
JAGNHB010000073.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_5017_length_26517_cov_25.379955, whole genome shotgun sequence 26,517
JAGNHB010000074.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_5108_length_26135_cov_22.320978, whole genome shotgun sequence 26,135
JAGNHB010000075.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_5121_length_26096_cov_22.631137, whole genome shotgun sequence 26,096
JAGNHB010000076.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_5146_length_26042_cov_22.782404, whole genome shotgun sequence 26,042
JAGNHB010000077.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_5204_length_25871_cov_24.593381, whole genome shotgun sequence 25,871
JAGNHB010000078.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_5512_length_24965_cov_22.660641, whole genome shotgun sequence 24,965
JAGNHB010000079.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_5658_length_24539_cov_25.577093, whole genome shotgun sequence 24,539
JAGNHB010000080.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_5703_length_24436_cov_23.104447, whole genome shotgun sequence 24,436
JAGNHB010000081.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_6742_length_21868_cov_24.371188, whole genome shotgun sequence 21,868
JAGNHB010000082.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_6871_length_21580_cov_26.328719, whole genome shotgun sequence 21,526
JAGNHB010000083.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_6931_length_21442_cov_20.998780, whole genome shotgun sequence 21,442
JAGNHB010000084.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_7704_length_19837_cov_24.963166, whole genome shotgun sequence 19,837
JAGNHB010000085.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_7766_length_19728_cov_22.623080, whole genome shotgun sequence 19,728
JAGNHB010000086.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_8065_length_19187_cov_24.403830, whole genome shotgun sequence 19,187
JAGNHB010000087.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_8379_length_18731_cov_23.859815, whole genome shotgun sequence 18,731
JAGNHB010000088.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_8670_length_18303_cov_23.138534, whole genome shotgun sequence 18,303
JAGNHB010000089.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_9328_length_17440_cov_22.529544, whole genome shotgun sequence 17,440
JAGNHB010000090.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_9526_length_17201_cov_23.619831, whole genome shotgun sequence 17,201
JAGNHB010000091.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_10141_length_16477_cov_26.078593, whole genome shotgun sequence 16,477
JAGNHB010000092.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_10845_length_15763_cov_21.279227, whole genome shotgun sequence 15,763
JAGNHB010000093.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_10960_length_15634_cov_24.799832, whole genome shotgun sequence 15,634
JAGNHB010000094.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_14925_length_12570_cov_28.345495, whole genome shotgun sequence 12,570
JAGNHB010000095.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_15013_length_12525_cov_30.832473, whole genome shotgun sequence 12,525
JAGNHB010000096.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_15902_length_12010_cov_20.725995, whole genome shotgun sequence 12,010
JAGNHB010000097.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_16394_length_11748_cov_23.468548, whole genome shotgun sequence 11,748
JAGNHB010000098.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_16426_length_11728_cov_24.623395, whole genome shotgun sequence 11,728
JAGNHB010000099.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_17577_length_11204_cov_23.596551, whole genome shotgun sequence 11,204
JAGNHB010000100.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_19427_length_10477_cov_23.610821, whole genome shotgun sequence 10,477
JAGNHB010000101.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_20260_length_10176_cov_28.329386, whole genome shotgun sequence 10,176
JAGNHB010000102.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_22582_length_9421_cov_35.629223, whole genome shotgun sequence 9,421
JAGNHB010000103.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_25461_length_8665_cov_24.615601, whole genome shotgun sequence 8,665
JAGNHB010000104.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_26846_length_8347_cov_42.480535, whole genome shotgun sequence 8,347
JAGNHB010000105.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_43621_length_5989_cov_24.353804, whole genome shotgun sequence 5,989
JAGNHB010000106.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_57284_length_4996_cov_20.536661, whole genome shotgun sequence 4,996
JAGNHB010000107.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_82278_length_3972_cov_34.021326, whole genome shotgun sequence 3,972
JAGNHB010000108.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_97044_length_3583_cov_22.878762, whole genome shotgun sequence 3,583
JAGNHB010000109.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_136930_length_2907_cov_26.899640, whole genome shotgun sequence 2,907
JAGNHB010000110.1 MAG: Acidobacteria bacterium isolate Go_SlDig_bin_149 Go_SlDig_149524_length_2759_cov_23.906155, whole genome shotgun sequence 2,759

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory