fast.genomicscompare 6,575 genera of bacteria & archaea

 

TMP-24 sp018240425 SZAS TMP-24

Genome identifier: GCA_018240425.1

NCBI assembly name: ASM1824042v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, TMP-24, TMP-24 sp018240425

NCBI taxonomy: Bacteria, Pseudomonadota

Scaffolds: 75

Genes: 3,254 Protein-coding: 3,178 RNAs: 49 pseudogenes: 27

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAFEFU010000001.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__1__length-46848, whole genome shotgun sequence 46,848
JAFEFU010000002.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__2__length-56005, whole genome shotgun sequence 56,005
JAFEFU010000003.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__3__length-15089, whole genome shotgun sequence 15,089
JAFEFU010000004.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__4__length-42248, whole genome shotgun sequence 42,248
JAFEFU010000005.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__5__length-25166, whole genome shotgun sequence 25,166
JAFEFU010000006.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__6__length-36584, whole genome shotgun sequence 36,584
JAFEFU010000007.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__7__length-5970, whole genome shotgun sequence 5,970
JAFEFU010000008.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__8__length-6279, whole genome shotgun sequence 6,279
JAFEFU010000009.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__9__length-11768, whole genome shotgun sequence 11,768
JAFEFU010000010.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__10__length-41959, whole genome shotgun sequence 41,959
JAFEFU010000011.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__11__length-53456, whole genome shotgun sequence 53,456
JAFEFU010000012.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__12__length-226219, whole genome shotgun sequence 226,219
JAFEFU010000013.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__13__length-20361, whole genome shotgun sequence 20,361
JAFEFU010000014.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__14__length-17174, whole genome shotgun sequence 17,174
JAFEFU010000015.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__15__length-16548, whole genome shotgun sequence 16,548
JAFEFU010000016.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__16__length-9026, whole genome shotgun sequence 9,026
JAFEFU010000017.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__17__length-4235, whole genome shotgun sequence 4,235
JAFEFU010000018.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__18__length-145060, whole genome shotgun sequence 145,060
JAFEFU010000019.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__19__length-170823, whole genome shotgun sequence 170,823
JAFEFU010000020.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__20__length-3614, whole genome shotgun sequence 3,614
JAFEFU010000021.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__21__length-26854, whole genome shotgun sequence 26,854
JAFEFU010000022.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__22__length-38031, whole genome shotgun sequence 38,031
JAFEFU010000023.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__23__length-69150, whole genome shotgun sequence 69,150
JAFEFU010000024.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__24__length-2775, whole genome shotgun sequence 2,775
JAFEFU010000025.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__25__length-9042, whole genome shotgun sequence 9,042
JAFEFU010000026.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__26__length-26955, whole genome shotgun sequence 26,955
JAFEFU010000027.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__27__length-45776, whole genome shotgun sequence 45,776
JAFEFU010000028.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__28__length-13369, whole genome shotgun sequence 13,369
JAFEFU010000029.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__29__length-90826, whole genome shotgun sequence 90,826
JAFEFU010000030.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__30__length-30260, whole genome shotgun sequence 30,260
JAFEFU010000031.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__31__length-4267, whole genome shotgun sequence 4,267
JAFEFU010000032.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__32__length-14706, whole genome shotgun sequence 14,706
JAFEFU010000033.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__33__length-4716, whole genome shotgun sequence 4,716
JAFEFU010000034.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__34__length-2786, whole genome shotgun sequence 2,786
JAFEFU010000035.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__35__length-56775, whole genome shotgun sequence 56,775
JAFEFU010000036.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__36__length-6739, whole genome shotgun sequence 6,739
JAFEFU010000037.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__37__length-125790, whole genome shotgun sequence 125,790
JAFEFU010000038.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__38__length-16081, whole genome shotgun sequence 16,081
JAFEFU010000039.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__39__length-14950, whole genome shotgun sequence 14,950
JAFEFU010000040.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__40__length-26109, whole genome shotgun sequence 26,109
JAFEFU010000041.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__41__length-3268, whole genome shotgun sequence 3,268
JAFEFU010000042.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__42__length-30855, whole genome shotgun sequence 30,855
JAFEFU010000043.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__43__length-5379, whole genome shotgun sequence 5,379
JAFEFU010000044.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__44__length-9443, whole genome shotgun sequence 9,443
JAFEFU010000045.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__45__length-28386, whole genome shotgun sequence 28,386
JAFEFU010000046.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__46__length-116406, whole genome shotgun sequence 116,406
JAFEFU010000047.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__47__length-59779, whole genome shotgun sequence 59,779
JAFEFU010000048.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__48__length-3434, whole genome shotgun sequence 3,434
JAFEFU010000049.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__49__length-123802, whole genome shotgun sequence 123,802
JAFEFU010000050.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__50__length-33280, whole genome shotgun sequence 33,280
JAFEFU010000051.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__51__length-28140, whole genome shotgun sequence 28,140
JAFEFU010000052.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__52__length-7132, whole genome shotgun sequence 7,132
JAFEFU010000053.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__53__length-2752, whole genome shotgun sequence 2,752
JAFEFU010000054.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__54__length-2619, whole genome shotgun sequence 2,619
JAFEFU010000055.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__55__length-144438, whole genome shotgun sequence 144,438
JAFEFU010000056.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__56__length-90584, whole genome shotgun sequence 90,584
JAFEFU010000057.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__57__length-8534, whole genome shotgun sequence 8,534
JAFEFU010000058.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__58__length-16460, whole genome shotgun sequence 16,460
JAFEFU010000059.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__59__length-105378, whole genome shotgun sequence 105,378
JAFEFU010000060.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__60__length-29065, whole genome shotgun sequence 29,065
JAFEFU010000061.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__61__length-4060, whole genome shotgun sequence 4,060
JAFEFU010000062.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__62__length-87019, whole genome shotgun sequence 87,019
JAFEFU010000063.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__63__length-2874, whole genome shotgun sequence 2,874
JAFEFU010000064.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__64__length-77329, whole genome shotgun sequence 77,329
JAFEFU010000065.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__65__length-32456, whole genome shotgun sequence 32,456
JAFEFU010000066.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__66__length-14331, whole genome shotgun sequence 14,331
JAFEFU010000067.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__67__length-8742, whole genome shotgun sequence 8,742
JAFEFU010000068.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__68__length-17977, whole genome shotgun sequence 17,977
JAFEFU010000069.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__69__length-32516, whole genome shotgun sequence 32,516
JAFEFU010000070.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__70__length-26488, whole genome shotgun sequence 26,488
JAFEFU010000071.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__71__length-351418, whole genome shotgun sequence 351,418
JAFEFU010000072.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__72__length-79009, whole genome shotgun sequence 79,009
JAFEFU010000073.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__73__length-76710, whole genome shotgun sequence 76,710
JAFEFU010000074.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__74__length-14302, whole genome shotgun sequence 14,302
JAFEFU010000075.1 MAG: Proteobacteria bacterium isolate SZAS TMP-24 CK_MAG-84__75__length-18036, whole genome shotgun sequence 18,036

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory